RNA–Protein interactions for RNA: ENST00000471596.1

CSRP1-204, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 758 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-204ENST00000471596 DDX19AQ9NUU7 478 aaKnown RBP11.2□□□□□ -0.62
CSRP1-204ENST00000471596 MCM9Q9NXL9 1143 aa11.2□□□□□ -0.62
CSRP1-204ENST00000471596 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 KIF28PB7ZC32 967 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
CSRP1-204ENST00000471596 YEATS4O95619 227 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
CSRP1-204ENST00000471596 GUCY1B3Q02153 619 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 EVX2Q03828 476 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 SSRP1Q08945 709 aaKnown RBP11.19□□□□□ -0.62
CSRP1-204ENST00000471596 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 KRT40Q6A162 431 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 PHKBQ93100 1093 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 POLR3EQ9NVU0 708 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 RCOR1Q9UKL0 485 aa11.19□□□□□ -0.62
CSRP1-204ENST00000471596 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
CSRP1-204ENST00000471596 MYH4Q9Y623 1939 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 PPFIA3O75145 1194 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 PRDM1O75626 825 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 FUT2Q10981 343 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 TROAPQ12815 778 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 KIF22Q14807 665 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 C16orf86Q6ZW13 317 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 TMTC3Q6ZXV5 915 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 CATIPQ7Z7H3 387 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 CCDC144CPQ8IYA2 1237 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 TGFBRAP1Q8WUH2 860 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 ANKS1AQ92625 1134 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 ZKSCAN4Q969J2 545 aaPredicted RBP11.18□□□□□ -0.62
CSRP1-204ENST00000471596 PGBD1Q96JS3 809 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 WRNIP1Q96S55 665 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 MAP3K14Q99558 947 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 SLC26A6Q9BXS9 759 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 TSPY26PQ9H489 355 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
CSRP1-204ENST00000471596 TCP11L1Q9NUJ3 509 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 RTEL1Q9NZ71 1219 aa11.18□□□□□ -0.62
CSRP1-204ENST00000471596 TRIOBPQ9H2D6 2365 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 TSPY2A6NKD2 308 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 BTBD19C9JJ37 291 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 CETPP11597 493 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 LIG1P18858 919 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 U2AF2P26368 475 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSRP1-204ENST00000471596 TRIM29Q14134 588 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 RCSD1Q6JBY9 416 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 RBM43Q6ZSC3 357 aaKnown RBP11.17□□□□□ -0.62
CSRP1-204ENST00000471596 MAPKAPK5Q8IW41 473 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 CRACR2BQ8N4Y2 399 aaPredicted RBP11.17□□□□□ -0.62
CSRP1-204ENST00000471596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSRP1-204ENST00000471596 DPF3Q92784 378 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 AIFM3Q96NN9 605 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 FUCA2Q9BTY2 467 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 ZNF287Q9HBT7 754 aa11.17□□□□□ -0.62
CSRP1-204ENST00000471596 TFIP11Q9UBB9 837 aaKnown RBP11.17□□□□□ -0.62
CSRP1-204ENST00000471596 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 DDTLA6NHG4 134 aaPredicted RBP11.16□□□□□ -0.62
CSRP1-204ENST00000471596 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 IRF6O14896 467 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 TLR2O60603 784 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 MMP1P03956 469 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 RASA1P20936 1047 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 LACTBP83111 547 aaPredicted RBP11.16□□□□□ -0.62
CSRP1-204ENST00000471596 SNAPC2Q13487 334 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 DGKHQ86XP1 1220 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 ERO1BQ86YB8 467 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 BICD2Q8TD16 824 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 KCNG4Q8TDN1 519 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 NUP133Q8WUM0 1156 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 TRIM34Q9BYJ4 488 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 FTOQ9C0B1 505 aaKnown RBP eCLIP11.16□□□□□ -0.62
CSRP1-204ENST00000471596 OSBPL5Q9H0X9 879 aaPredicted RBP11.16□□□□□ -0.62
CSRP1-204ENST00000471596 RBSNQ9H1K0 784 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 NUP62CLQ9H1M0 184 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 DHX36Q9H2U1 1008 aaKnown RBP11.16□□□□□ -0.62
CSRP1-204ENST00000471596 CLSTN2Q9H4D0 955 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.62
CSRP1-204ENST00000471596 CPA4Q9UI42 421 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 SNCAIPQ9Y6H5 919 aa11.16□□□□□ -0.62
CSRP1-204ENST00000471596 GOLGA6L4A6NEF3 574 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
CSRP1-204ENST00000471596 PLEKHA8P1O95397 391 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 POLR3DP05423 398 aaPredicted RBP11.15□□□□□ -0.62
CSRP1-204ENST00000471596 INPP5BP32019 993 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 MTFR1Q15390 333 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 FAM47AQ5JRC9 791 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.62
CSRP1-204ENST00000471596 LINC00301Q8NCQ3 95 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 CTCFLQ8NI51 663 aaPredicted RBP11.15□□□□□ -0.62
CSRP1-204ENST00000471596 DYNLL2Q96FJ2 89 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 GJB4Q9NTQ9 266 aa11.15□□□□□ -0.62
CSRP1-204ENST00000471596 PI4KBQ9UBF8 816 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms