RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 RIOK1Q9BRS2 568 aaKnown RBP11.02□□□□□ -0.65
CPSF4-211ENST00000471455 MOV10L1Q9BXT6 1211 aaKnown RBP11.02□□□□□ -0.65
CPSF4-211ENST00000471455 SPATC1LQ9H0A9 340 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 FLRT1Q9NZU1 646 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 ATP11BQ9Y2G3 1177 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 SEPT4O43236 478 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 PDE6AP16499 860 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 PLCD1P51178 756 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 GABPAQ06546 454 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 CEP85Q6P2H3 762 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 CLASRPQ8N2M8 674 aaKnown RBP11.01□□□□□ -0.65
CPSF4-211ENST00000471455 NPLOC4Q8TAT6 608 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.01□□□□□ -0.65
CPSF4-211ENST00000471455 ANTXR1Q9H6X2 564 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
CPSF4-211ENST00000471455 HCSTQ9UBK5 93 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 NRBP1Q9UHY1 535 aa11.01□□□□□ -0.65
CPSF4-211ENST00000471455 HMMRO75330 724 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 FLOT1O75955 427 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 SLC25A27O95847 323 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 MS4A1P11836 297 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 ERCC3P19447 782 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 COPB2P35606 906 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 ICA1Q05084 483 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 PLS1Q14651 629 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 NUDT18Q6ZVK8 323 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 NCAPG2Q86XI2 1143 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 PHF6Q8IWS0 365 aaKnown RBP eCLIP11□□□□□ -0.65
CPSF4-211ENST00000471455 CCDC17Q96LX7 622 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 DDX24Q9GZR7 859 aaKnown RBP eCLIP11□□□□□ -0.65
CPSF4-211ENST00000471455 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 A0A0G2JMZ2 1700 aa11□□□□□ -0.65
CPSF4-211ENST00000471455 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 WDR46O15213 610 aaKnown RBP10.99□□□□□ -0.65
CPSF4-211ENST00000471455 IFIT2P09913 472 aaKnown RBP10.99□□□□□ -0.65
CPSF4-211ENST00000471455 RARBP10826 455 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 FCER1AP12319 257 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 GUCY1A2P33402 732 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 SNX17Q15036 470 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-211ENST00000471455 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 SLC39A5Q6ZMH5 540 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 TRPV1Q8NER1 839 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 ANKK1Q8NFD2 765 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 RHPN1Q8TCX5 695 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
CPSF4-211ENST00000471455 DCP1AQ9NPI6 582 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-211ENST00000471455 ATP8A2Q9NTI2 1148 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 ZNF532Q9HCE3 1301 aa10.99□□□□□ -0.65
CPSF4-211ENST00000471455 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 MYH8P13535 1937 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 A0A1W2PRG0 241 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 GOLGA8CPA6NN73 597 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 GOLIM4O00461 696 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 IGHA2P01877 340 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 KCTD2Q14681 263 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 TRIM60Q495X7 471 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 RNF180Q86T96 592 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 GUCD1Q96NT3 240 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
CPSF4-211ENST00000471455 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 TMX2Q9Y320 296 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 ADGRG1Q9Y653 693 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 ROBO3Q96MS0 1386 aa10.98□□□□□ -0.65
CPSF4-211ENST00000471455 RLFQ13129 1914 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 TMEM265A0A087WTH1 108 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 RLBP1P12271 317 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 FECHP22830 423 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 PTPN5P54829 565 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 SMAD3P84022 425 aaKnown RBP10.97□□□□□ -0.65
CPSF4-211ENST00000471455 LRRC41Q15345 812 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 SMYD5Q6GMV2 418 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 LCORLQ8N3X6 602 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 SDR42E1Q8WUS8 393 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 ATG4CQ96DT6 458 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 MAML3Q96JK9 1138 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 MMP19Q99542 508 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 KANSL2Q9H9L4 492 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 IL1RAPL2Q9NP60 686 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 XPNPEP3Q9NQH7 507 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 PHF24Q9UPV7 400 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 DIS3Q9Y2L1 958 aaKnown RBP10.97□□□□□ -0.65
CPSF4-211ENST00000471455 COL6A3P12111 3177 aa10.97□□□□□ -0.65
CPSF4-211ENST00000471455 COBLO75128 1261 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 RAB11FIP3O75154 756 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 AKR1A1P14550 325 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 ADCYAP1R1P41586 468 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 HNRNPUQ00839 825 aaKnown RBP eCLIP10.96□□□□□ -0.65
CPSF4-211ENST00000471455 FAM47AQ5JRC9 791 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 ZSCAN25Q6NSZ9 544 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 RPAP2Q8IXW5 612 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-211ENST00000471455 SPICE1Q8N0Z3 855 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 SLC44A5Q8NCS7 719 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 FAM161BQ96MY7 647 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 PDLIM7Q9NR12 457 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 PAG1Q9NWQ8 432 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 CNPY2Q9Y2B0 182 aa10.96□□□□□ -0.65
CPSF4-211ENST00000471455 TACC3Q9Y6A5 838 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms