RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 MAGEB6Q8N7X4 407 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 TDRD7Q8NHU6 1098 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 WDR66Q8TBY9 1149 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 IFT43Q96FT9 208 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 JAKMIP1Q96N16 626 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 TRERF1Q96PN7 1200 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 PUS7LQ9H0K6 701 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 CWC22Q9HCG8 908 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 NSFL1CQ9UNZ2 370 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 BCS1LQ9Y276 419 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 CYP46A1Q9Y6A2 500 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 SALL1Q9NSC2 1324 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 TNRC6CQ9HCJ0 1690 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 QSER1Q2KHR3 1735 aa7.21□□□□□ -1.25
SMNDC1-204ENST00000471297 PATL2C9JE40 543 aaKnown RBP7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 GPAA1O43292 621 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 UFL1O94874 794 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 CHGBP05060 677 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 VSIG8P0DPA2 414 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 IL1R1P14778 569 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 CASTP20810 708 aaKnown RBP7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 CYP7A1P22680 504 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 ANKRD1Q15327 319 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 IMMTQ16891 758 aaKnown RBP7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 BLOC1S2Q6QNY1 142 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 TREML4Q6UXN2 200 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 RUFY3Q7L099 469 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 TBC1D16Q8TBP0 767 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 ZNF622Q969S3 477 aaKnown RBP eCLIP7.21□□□□□ -1.264e-9■□□□□ 9.3
SMNDC1-204ENST00000471297 ZSCAN31Q96LW9 406 aaPredicted RBP7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 NEK1Q96PY6 1258 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 STRBPQ96SI9 672 aaKnown RBP7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 EYA3Q99504 573 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 CFHR5Q9BXR6 569 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 CD209Q9NNX6 404 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 PDRG1Q9NUG6 133 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 CHMP5Q9NZZ3 219 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 RAI14Q9P0K7 980 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 WWC3Q9ULE0 1092 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 LIMCH1Q9UPQ0 1083 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 COL4A1P02462 1669 aa7.21□□□□□ -1.26
SMNDC1-204ENST00000471297 WTIPA6NIX2 430 aaPredicted RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 KHNYNO15037 678 aaKnown RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 MICAL2O94851 1124 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 ABL1P00519 1130 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 FGAP02671 866 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 LDHCP07864 332 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 CYP21A2P08686 494 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 KLRK1P26718 216 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 GSTO1P78417 241 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 TNP2Q05952 138 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 CUL4AQ13619 759 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 ADCK5Q3MIX3 580 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 SAMD5Q5TGI4 173 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 NAA16Q6N069 864 aaPredicted RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 BTLAQ7Z6A9 289 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 TXNRD3Q86VQ6 643 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 INTS4Q96HW7 963 aaKnown RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 CEP63Q96MT8 703 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 TTC14Q96N46 770 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 UPF3BQ9BZI7 483 aaKnown RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 NACAP1Q9BZK3 213 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 ZC3H12CQ9C0D7 883 aaKnown RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 COA1Q9GZY4 146 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 SH2B1Q9NRF2 756 aaPredicted RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 NDFIP2Q9NV92 336 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 STIM2Q9P246 746 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 ABCF2Q9UG63 623 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 POLLQ9UGP5 575 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 DMGDHQ9UI17 866 aaKnown RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 PHF24Q9UPV7 400 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 AKAP11Q9UKA4 1901 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 ZMYM6O95789 1325 aa7.2□□□□□ -1.26
SMNDC1-204ENST00000471297 CASZ1Q86V15 1759 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 TGFBR3LH3BV60 316 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 TNFRSF10BO14763 440 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 ZNF213O14771 459 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 APPP05067 770 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 LDHBP07195 334 aaKnown RBP7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 MAPTP10636 758 aaKnown RBP7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 RPS6KB1P23443 525 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 AK2P54819 239 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 CHAF1AQ13111 956 aaPredicted RBP7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 GIMAP6Q6P9H5 292 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 DPP8Q6V1X1 898 aaPredicted RBP7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 DHX32Q7L7V1 743 aaKnown RBP7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 CERS3Q8IU89 383 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 SUPT20HQ8NEM7 779 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 HELQQ8TDG4 1101 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 TBC1D22AQ8WUA7 517 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 CHMP4CQ96CF2 233 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 ABHD17AQ96GS6 310 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 TMX3Q96JJ7 454 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 COL25A1Q9BXS0 654 aaPredicted RBP7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 TAF1P21675 1872 aa7.19□□□□□ -1.26
SMNDC1-204ENST00000471297 A0A1B0GUL6 1792 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 DCDC2BA2VCK2 349 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 E7EWF7 191 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms