RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TUBB2AQ13885 445 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 RFX6Q8HWS3 928 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 CDKL2Q92772 493 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ABHD8Q96I13 439 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 TUBB2BQ9BVA1 445 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 DISP1Q96F81 1524 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 NSD3Q9BZ95 1437 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 GRIN2BQ13224 1484 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 SOX5P35711 763 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 NEK2P51955 445 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 KHDRBS2Q5VWX1 349 aaKnown RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 TEKT4Q8WW24 435 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 USP6NLQ92738 828 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 SLF1Q9BQI6 1058 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ZBED4O75132 1171 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 PPP1R2P41236 205 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 PCYT1AP49585 367 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 PDXDC1Q6P996 788 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 TEX11Q8IYF3 940 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 BTN2A2Q8WVV5 523 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 N4BP2L2Q92802 583 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ARHGEF1Q92888 912 aaKnown RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 NUP58Q9BVL2 599 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 TSKSQ9UJT2 592 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 KDRP35968 1356 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 KRIT1O00522 736 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 ANXA1P04083 346 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 RNF207Q6ZRF8 634 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 RAPGEF5Q92565 580 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 EXT2Q93063 718 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 MMTAG2Q9BU76 263 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 MED4Q9NPJ6 270 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 HOMER3Q9NSC5 361 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 TRPC5Q9UL62 973 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 PACSIN2Q9UNF0 486 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 NSFL1CQ9UNZ2 370 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 ZBTB12Q9Y330 459 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 COPG1Q9Y678 874 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 RAPGEF2Q9Y4G8 1499 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 PTPRCP08575 1304 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 A6NJR5 290 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 SRGAP2BP0DMP2 458 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 CYP2J2P51589 502 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 MRPL28Q13084 256 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 ATG16L1Q676U5 607 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 CPXCR1Q8N123 301 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 DEPTORQ8TB45 409 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 RBM46Q8TBY0 533 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 PAGR1Q9BTK6 254 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 CCPG1Q9ULG6 757 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 SYNJ2O15056 1496 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 GRIN2AQ12879 1464 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 PI4KAP2A4QPH2 592 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 GOLGA8KD6RF30 607 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 KCNK3O14649 394 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 MAP3K7O43318 606 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 TNNC2P02585 160 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 BFSP1Q12934 665 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 PTK2BQ14289 1009 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 HERC4Q5GLZ8 1057 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 MAP7D3Q8IWC1 876 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 PI4KAP1Q8N8J0 262 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 SNX29Q8TEQ0 813 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 SNX19Q92543 992 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 EFHD1Q9BUP0 239 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 SNAPC4Q5SXM2 1469 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 SYCE1LA8MT33 242 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 RNF113AO15541 343 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 BNIP3LO60238 219 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 OCA2Q04671 838 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 ART3Q13508 389 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 CAPRIN1Q14444 709 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 C20orf194Q5TEA3 1177 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 RRAGAQ7L523 313 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 BRAPQ7Z569 592 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 B4GALNT2Q8NHY0 566 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 GIPC2Q8TF65 315 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 GLG1Q92896 1179 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 ZNF653Q96CK0 615 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 GSDMAQ96QA5 445 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 KIFC3Q9BVG8 833 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 APOL6Q9BWW8 343 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 PTPN22Q9Y2R2 807 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 BUB1O43683 1085 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 CLCN1P35523 988 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 HADHAP40939 763 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 KCNA1Q09470 495 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 E2F5Q15329 346 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 TMCO5AQ8N6Q1 288 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 DDX17Q92841 729 aaKnown RBP7.53□□□□□ -1.2
BRCA1-210ENST00000471181 OTULINQ96BN8 352 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 EYA3Q99504 573 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 TEX12Q9BXU0 123 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 DNM3Q9UQ16 869 aa7.53□□□□□ -1.2
BRCA1-210ENST00000471181 ARHGAP5Q13017 1502 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms