RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 ASPRV1Q53RT3 343 aa19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 NT5DC1Q5TFE4 455 aa19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 ARL6IP4Q66PJ3 421 aaKnown RBP19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 CIAPIN1Q6FI81 312 aa19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 HEATR3Q7Z4Q2 680 aa19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 RIOX1Q9H6W3 641 aa19.3■□□□□ 0.68
SMARCD3-206ENST00000470588 CCDC194A0A1B0GVG4 234 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 SHMT1P34896 483 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 SARSP49591 514 aaKnown RBP19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 DLGAP5Q15398 846 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 TYW1BQ6NUM6 668 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 PYM1Q9BRP8 204 aaKnown RBP19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 TRIM34Q9BYJ4 488 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 ZMYND12Q9H0C1 365 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 PCDHA6Q9UN73 950 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 PCDHA8Q9Y5H6 950 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 USP17L5A8MUK1 530 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 NFKBIEO00221 500 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 TTLL1O95922 423 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 SNHG28P0DPA3 235 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 MMP14P50281 582 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 USP49Q70CQ1 688 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 TRIML1Q8N9V2 468 aa19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 SEC63Q9UGP8 760 aaKnown RBP19.29■□□□□ 0.68
SMARCD3-206ENST00000470588 hCG_1984214I3L0E3 225 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 ADAMTS3O15072 1205 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 SLFN14P0C7P3 912 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 PDHBP11177 359 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 GNA11P29992 359 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 ZSCAN29Q8IWY8 852 aaPredicted RBP19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 ZNF713Q8N859 430 aaPredicted RBP19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 C4orf32Q8N8J7 132 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 SMARCE1Q969G3 411 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 GMLQ99445 158 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 C6orf50Q9HD87 102 aa19.28■□□□□ 0.68
SMARCD3-206ENST00000470588 MYO1BO43795 1136 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 ENTPD3O75355 529 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 MCM7P33993 719 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 NFIAQ12857 509 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 NCAPHQ15003 741 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 ISM2Q6H9L7 571 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 CCDC186Q7Z3E2 898 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 SYMPKQ92797 1274 aaKnown RBP19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 EPSTI1Q96J88 318 aa19.27■□□□□ 0.68
SMARCD3-206ENST00000470588 FOXN1O15353 648 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 SMC2O95347 1197 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 NAPAP54920 295 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 CXCL9Q07325 125 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 KRT25Q7Z3Z0 450 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 SH3RF1Q7Z6J0 888 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 PDILTQ8N807 584 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 MLKLQ8NB16 471 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 NLGN2Q8NFZ4 835 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 TDRD3Q9H7E2 651 aaKnown RBP19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 PI4KBQ9UBF8 816 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 DACH1Q9UI36 760 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 MAN1B1Q9UKM7 699 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 PCDHAC2Q9Y5I4 1007 aa19.27■□□□□ 0.67
SMARCD3-206ENST00000470588 COL2A1P02458 1487 aaPredicted RBP19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 ESYT2A0FGR8 921 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 VWA3AA6NCI4 1184 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 SPDYE2BA6NHP3 402 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 SPDYE6P0CI01 402 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 PTGS1P23219 599 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 LONP1P36776 959 aaKnown RBP19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 EIF6P56537 245 aaKnown RBP19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 TCP10Q12799 353 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 ZFPM1Q8IX07 1006 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 SPATA20Q8TB22 786 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 DHX58Q96C10 678 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 KCNF1Q9H3M0 494 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 VAT1LQ9HCJ6 419 aa19.26■□□□□ 0.67
SMARCD3-206ENST00000470588 CACNB3P54284 484 aa19.25■□□□□ 0.67
SMARCD3-206ENST00000470588 MORC3Q14149 939 aa19.25■□□□□ 0.67
SMARCD3-206ENST00000470588 CT47A1Q5JQC4 288 aaPredicted RBP19.25■□□□□ 0.67
SMARCD3-206ENST00000470588 PIGSQ96S52 555 aa19.25■□□□□ 0.67
SMARCD3-206ENST00000470588 UBA5Q9GZZ9 404 aa19.25■□□□□ 0.67
SMARCD3-206ENST00000470588 FAM198AQ9UFP1 575 aa19.25■□□□□ 0.67
SMARCD3-206ENST00000470588 ZBTB12Q9Y330 459 aaPredicted RBP19.25■□□□□ 0.67
SMARCD3-206ENST00000470588 LAD1O00515 517 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 PRR29P0C7W0 189 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 RPS12P25398 132 aaKnown RBP19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 MYL5Q02045 173 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 IQUBQ8NA54 791 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 RASGRP4Q8TDF6 673 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 PAGE5Q96GU1 130 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 PRMT6Q96LA8 375 aaPredicted RBP19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 CPVLQ9H3G5 476 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 NRBP1Q9UHY1 535 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 A0A087X0B3 334 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 RASSF7Q02833 373 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 ZNF543Q08ER8 600 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 NOLC1Q14978 699 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 IL17AQ16552 155 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 RASGRP2Q7LDG7 609 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms