RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 TINF2Q9BSI4 451 aa37.21■■■■□ 3.55
HMG20B-209ENST00000470356 HELLSQ9NRZ9 838 aa37.21■■■■□ 3.55
HMG20B-209ENST00000470356 DDX52Q9Y2R4 599 aaKnown RBP eCLIP37.21■■■■□ 3.55
HMG20B-209ENST00000470356 GJC2Q5T442 439 aaPredicted RBP37.2■■■■□ 3.55
HMG20B-209ENST00000470356 KIFC2Q96AC6 838 aa37.2■■■■□ 3.55
HMG20B-209ENST00000470356 RIPK3Q9Y572 518 aa37.2■■■■□ 3.55
HMG20B-209ENST00000470356 MAGEA10P43363 369 aaPredicted RBP37.19■■■■□ 3.54
HMG20B-209ENST00000470356 ANO1Q5XXA6 986 aa37.19■■■■□ 3.54
HMG20B-209ENST00000470356 SLFN13Q68D06 897 aa37.19■■■■□ 3.54
HMG20B-209ENST00000470356 SLC38A10Q9HBR0 1119 aa37.19■■■■□ 3.54
HMG20B-209ENST00000470356 ALX1Q15699 326 aa37.18■■■■□ 3.54
HMG20B-209ENST00000470356 PPP4R3BQ5MIZ7 849 aa37.18■■■■□ 3.54
HMG20B-209ENST00000470356 VPS53Q5VIR6 699 aa37.18■■■■□ 3.54
HMG20B-209ENST00000470356 CPXCR1Q8N123 301 aa37.18■■■■□ 3.54
HMG20B-209ENST00000470356 ANAPC4Q9UJX5 808 aa37.18■■■■□ 3.54
HMG20B-209ENST00000470356 CTDP1Q9Y5B0 961 aaPredicted RBP37.18■■■■□ 3.54
HMG20B-209ENST00000470356 LAMA3Q16787 3333 aa37.17■■■■□ 3.54
HMG20B-209ENST00000470356 BMP3P12645 472 aa37.17■■■■□ 3.54
HMG20B-209ENST00000470356 CTDSPL2Q05D32 466 aa37.17■■■■□ 3.54
HMG20B-209ENST00000470356 SMC5Q8IY18 1101 aa37.17■■■■□ 3.54
HMG20B-209ENST00000470356 LNPKQ9C0E8 428 aa37.17■■■■□ 3.54
HMG20B-209ENST00000470356 RWDD1Q9H446 243 aaPredicted RBP37.17■■■■□ 3.54
HMG20B-209ENST00000470356 KBTBD13C9JR72 458 aa37.16■■■■□ 3.54
HMG20B-209ENST00000470356 ATN1P54259 1190 aaPredicted RBP37.15■■■■□ 3.54
HMG20B-209ENST00000470356 OAZ1P54368 228 aa37.15■■■■□ 3.54
HMG20B-209ENST00000470356 DDX11Q96FC9 970 aa37.15■■■■□ 3.54
HMG20B-209ENST00000470356 RAVER2Q9HCJ3 691 aaKnown RBP37.15■■■■□ 3.54
HMG20B-209ENST00000470356 INCENPQ9NQS7 918 aa37.15■■■■□ 3.54
HMG20B-209ENST00000470356 DNAJC25-GNG10A0A024R161 153 aa37.14■■■■□ 3.54
HMG20B-209ENST00000470356 FDX1P10109 184 aa37.14■■■■□ 3.54
HMG20B-209ENST00000470356 MCMDC2Q4G0Z9 681 aa37.14■■■■□ 3.54
HMG20B-209ENST00000470356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP37.14■■■■□ 3.54
HMG20B-209ENST00000470356 MSL3Q8N5Y2 521 aaKnown RBP37.14■■■■□ 3.54
HMG20B-209ENST00000470356 GMCL1Q96IK5 515 aa37.14■■■■□ 3.54
HMG20B-209ENST00000470356 FAM227BQ96M60 508 aa37.14■■■■□ 3.54
HMG20B-209ENST00000470356 TSPY2A6NKD2 308 aa37.13■■■■□ 3.53
HMG20B-209ENST00000470356 LRRC41Q15345 812 aa37.13■■■■□ 3.53
HMG20B-209ENST00000470356 IL17RBQ9NRM6 502 aa37.13■■■■□ 3.53
HMG20B-209ENST00000470356 A0A0D9SFI3 127 aa37.12■■■■□ 3.53
HMG20B-209ENST00000470356 TMEM232C9JQI7 657 aa37.12■■■■□ 3.53
HMG20B-209ENST00000470356 SOX1O00570 391 aaPredicted RBP37.12■■■■□ 3.53
HMG20B-209ENST00000470356 TAL1P17542 331 aaPredicted RBP37.12■■■■□ 3.53
HMG20B-209ENST00000470356 SLC4A3P48751 1232 aa37.12■■■■□ 3.53
HMG20B-209ENST00000470356 STX8Q9UNK0 236 aa37.12■■■■□ 3.53
HMG20B-209ENST00000470356 TACC3Q9Y6A5 838 aa37.12■■■■□ 3.53
HMG20B-209ENST00000470356 ORC4O43929 436 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 MYCNP04198 464 aaPredicted RBP37.11■■■■□ 3.53
HMG20B-209ENST00000470356 FGRP09769 529 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 ZNF865P0CJ78 1059 aaPredicted RBP37.11■■■■□ 3.53
HMG20B-209ENST00000470356 RARBP10826 455 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 SLC1A4P43007 532 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 CHST13Q8NET6 341 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 CHURC1Q8WUH1 139 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 UBE2OQ9C0C9 1292 aaKnown RBP37.11■■■■□ 3.53
HMG20B-209ENST00000470356 FBXO40Q9UH90 709 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 CNPY2Q9Y2B0 182 aa37.11■■■■□ 3.53
HMG20B-209ENST00000470356 FGAP02671 866 aa37.1■■■■□ 3.53
HMG20B-209ENST00000470356 STAT2P52630 851 aa37.1■■■■□ 3.53
HMG20B-209ENST00000470356 RTP1P59025 263 aa37.1■■■■□ 3.53
HMG20B-209ENST00000470356 SLC39A5Q6ZMH5 540 aa37.1■■■■□ 3.53
HMG20B-209ENST00000470356 FAM160B2Q86V87 743 aa37.1■■■■□ 3.53
HMG20B-209ENST00000470356 XPNPEP3Q9NQH7 507 aa37.1■■■■□ 3.53
HMG20B-209ENST00000470356 RANBP6O60518 1105 aaKnown RBP37.09■■■■□ 3.53
HMG20B-209ENST00000470356 NMT2O60551 498 aa37.09■■■■□ 3.53
HMG20B-209ENST00000470356 MCCP23508 829 aa37.09■■■■□ 3.53
HMG20B-209ENST00000470356 B4GALNT3Q6L9W6 998 aa37.09■■■■□ 3.53
HMG20B-209ENST00000470356 MAMDC4Q6UXC1 1216 aa37.09■■■■□ 3.53
HMG20B-209ENST00000470356 ZNF467Q7Z7K2 595 aaPredicted RBP37.09■■■■□ 3.53
HMG20B-209ENST00000470356 STAG1Q8WVM7 1258 aa37.09■■■■□ 3.53
HMG20B-209ENST00000470356 ISY1Q9ULR0 285 aaKnown RBP37.09■■■■□ 3.53
HMG20B-209ENST00000470356 SYNGAP1Q96PV0 1343 aa37.09■■■■□ 3.53
HMG20B-209ENST00000470356 TRIM6-TRIM34B2RNG4 842 aa37.08■■■■□ 3.53
HMG20B-209ENST00000470356 PLA2G6O60733 806 aa37.08■■■■□ 3.53
HMG20B-209ENST00000470356 ADCYAP1R1P41586 468 aa37.08■■■■□ 3.53
HMG20B-209ENST00000470356 TDHQ8IZJ6 230 aa37.08■■■■□ 3.53
HMG20B-209ENST00000470356 IGHDP01880 384 aa37.07■■■■□ 3.52
HMG20B-209ENST00000470356 AKR1A1P14550 325 aa37.07■■■■□ 3.52
HMG20B-209ENST00000470356 NOVP48745 357 aa37.07■■■■□ 3.52
HMG20B-209ENST00000470356 NMIQ13287 307 aaPredicted RBP37.07■■■■□ 3.52
HMG20B-209ENST00000470356 SNX17Q15036 470 aa37.07■■■■□ 3.52
HMG20B-209ENST00000470356 RCSD1Q6JBY9 416 aa37.07■■■■□ 3.52
HMG20B-209ENST00000470356 CHD1LQ86WJ1 897 aa37.07■■■■□ 3.52
HMG20B-209ENST00000470356 ANKRD35Q8N283 1001 aa37.07■■■■□ 3.52
HMG20B-209ENST00000470356 MCM3APO60318 1980 aa37.06■■■■□ 3.52
HMG20B-209ENST00000470356 SNAI1O95863 264 aaPredicted RBP37.06■■■■□ 3.52
HMG20B-209ENST00000470356 HSPD1P10809 573 aaKnown RBP37.06■■■■□ 3.52
HMG20B-209ENST00000470356 MDM2Q00987 491 aaPredicted RBP37.06■■■■□ 3.52
HMG20B-209ENST00000470356 LRCH3Q96II8 777 aa37.06■■■■□ 3.52
HMG20B-209ENST00000470356 ZMYM6O95789 1325 aa37.06■■■■□ 3.52
HMG20B-209ENST00000470356 NUCB1Q02818 461 aa37.05■■■■□ 3.52
HMG20B-209ENST00000470356 IKQ13123 557 aaPredicted RBP37.05■■■■□ 3.52
HMG20B-209ENST00000470356 LRIT3Q3SXY7 679 aa37.05■■■■□ 3.52
HMG20B-209ENST00000470356 RNF180Q86T96 592 aa37.05■■■■□ 3.52
HMG20B-209ENST00000470356 ZNF589Q86UQ0 364 aaPredicted RBP37.05■■■■□ 3.52
HMG20B-209ENST00000470356 RILPL2Q969X0 211 aa37.05■■■■□ 3.52
HMG20B-209ENST00000470356 OSBPL3Q9H4L5 887 aa37.05■■■■□ 3.52
HMG20B-209ENST00000470356 PHF24Q9UPV7 400 aa37.05■■■■□ 3.52
HMG20B-209ENST00000470356 ATP11BQ9Y2G3 1177 aa37.05■■■■□ 3.52
HMG20B-209ENST00000470356 C1orf53Q5VUE5 145 aa37.04■■■■□ 3.52
HMG20B-209ENST00000470356 PLEKHM2Q8IWE5 1019 aa37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms