RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 TUBA1BP68363 451 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 AMPD3Q01432 767 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 ITIH3Q06033 890 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 PPIDQ08752 370 aaKnown RBP5.79□□□□□ -1.48
COL3A1-205ENST00000470167 PAK2Q13177 524 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 DDX10Q13206 875 aaKnown RBP5.79□□□□□ -1.48
COL3A1-205ENST00000470167 SLC10A5Q5PT55 438 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 COX20Q5RI15 118 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 C10orf62Q5T681 223 aaPredicted RBP5.79□□□□□ -1.48
COL3A1-205ENST00000470167 RCSD1Q6JBY9 416 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 TUBA1AQ71U36 451 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 KIAA1328Q86T90 577 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 TMEM151BQ8IW70 566 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 ZNF295-AS1Q8N0V1 137 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 MEIOBQ8N635 442 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 ESX1Q8N693 406 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 LINC00469Q8N7U9 141 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 CCDC150Q8NCX0 1101 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 PARD3BQ8TEW8 1205 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 GIPC2Q8TF65 315 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 HPS1Q92902 700 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 SH3KBP1Q96B97 665 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 MOGAT1Q96PD6 335 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 CABP1Q9NZU7 370 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 LCMT1Q9UIC8 334 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 FAM184BQ9ULE4 1060 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 TTF2Q9UNY4 1162 aaKnown RBP5.79□□□□□ -1.48
COL3A1-205ENST00000470167 PRKAB1Q9Y478 270 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 PARP3Q9Y6F1 533 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 ROCK1Q13464 1354 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 SERTM1A2A2V5 107 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ENO4A6NNW6 628 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ABLIM1O14639 778 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 KPNA6O60684 536 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 FESP07332 822 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 PDGFRBP09619 1106 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ZFXP17010 805 aaPredicted RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 NPR3P17342 541 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ATF7P17544 494 aaPredicted RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 HSD3B2P26439 372 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 PLA2G4AP47712 749 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 KIF11P52732 1056 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 SLC8A3P57103 927 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 PHEXP78562 749 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 GPSM2P81274 684 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 DDR1Q08345 913 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 PDE3BQ13370 1112 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ACAP1Q15027 740 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ZRSR1Q15695 479 aaKnown RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ENOX2Q16206 610 aaKnown RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 CCDC14Q49A88 953 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 Q4G0T1 1027 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 SPECC1Q5M775 1068 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 TEX35Q5T0J7 233 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ARMC4Q5T2S8 1044 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 TSHZ3Q63HK5 1081 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 POTEAQ6S8J7 498 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 LRRC31Q6UY01 552 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 GBP6Q6ZN66 633 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 RASGRP2Q7LDG7 609 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ZNF804AQ7Z570 1209 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ARHGAP22Q7Z5H3 698 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 PPFIBP1Q86W92 1011 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 SNX32Q86XE0 403 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ERC1Q8IUD2 1116 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 GBP7Q8N8V2 638 aaPredicted RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 TRPC4APQ8TEL6 797 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ZFAND2BQ8WV99 257 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 RSAD2Q8WXG1 361 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 RABGGTAQ92696 567 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 RPGRQ92834 1020 aaKnown RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 EPSTI1Q96J88 318 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ZSCAN10Q96SZ4 725 aaPredicted RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 PLEKHA5Q9HAU0 1116 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 RIC8AQ9NPQ8 531 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 DDX21Q9NR30 783 aaKnown RBP eCLIP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 CHST12Q9NRB3 414 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 DISC1Q9NRI5 854 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 SPTLC3Q9NUV7 552 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 KCTD5Q9NXV2 234 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 HECW2Q9P2P5 1572 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 EPS15L1Q9UBC2 864 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 DDX25Q9UHL0 483 aaKnown RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 EVLQ9UI08 416 aaPredicted RBP5.78□□□□□ -1.48
COL3A1-205ENST00000470167 DCTN4Q9UJW0 460 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 LRFN2Q9ULH4 789 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 PRELID1Q9Y255 219 aa5.78□□□□□ -1.48
COL3A1-205ENST00000470167 ARHGAP31Q2M1Z3 1444 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 GOLGA6L10A6NI86 522 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 TMEM232C9JQI7 657 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 ZNF254O75437 659 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 SKAP2O75563 359 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 FAM13AO94988 1023 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 NCAM1P13591 858 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 GNAT2P19087 354 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 NOS2P35228 1153 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 RANBP1P43487 201 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 GCLCP48506 637 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 MRPL28Q13084 256 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms