RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-210	ENST00000470086	SPATC1L	Q9H0A9	340 aa		10.15	□□□□□ -0.78
LSM2-210	ENST00000470086	WNT8A	Q9H1J5	351 aa		10.15	□□□□□ -0.78
LSM2-210	ENST00000470086	TECTA	O75443	2155 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086		A0A1B0GUL7	405 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	CIAO1	O76071	339 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	CDK7	P50613	346 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	CCNA1	P78396	465 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	FOXK1	P85037	733 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	OTOP2	Q7RTS6	562 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	FAM126B	Q8IXS8	530 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	ZGPAT	Q8N5A5	531 aa	Known RBP	10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	KLHDC9	Q8NEP7	349 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	HERVK_113	Q902F9	699 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	XAGE2	Q96GT9	111 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	STARD7	Q9NQZ5	370 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	PI4KB	Q9UBF8	816 aa		10.14	□□□□□ -0.79
LSM2-210	ENST00000470086	ZNF521	Q96K83	1311 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	APBB1	O00213	710 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	CTAGE5	O15320	804 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	LPXN	O60711	386 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	GLRX3	O76003	335 aa	Known RBP	10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	CA3	P07451	260 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	HOXB1	P14653	301 aa	Predicted RBP	10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	PPIG	Q13427	754 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	RAB30	Q15771	203 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	MRPL50	Q8N5N7	158 aa	Known RBP	10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	ATG4C	Q96DT6	458 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	FEZ1	Q99689	392 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	KIAA1683	Q9H0B3	1180 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	SLC28A3	Q9HAS3	691 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	GNL3L	Q9NVN8	582 aa	Known RBP	10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	SPTBN4	Q9H254	2564 aa		10.13	□□□□□ -0.79
LSM2-210	ENST00000470086	DMXL1	Q9Y485	3027 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	COL4A6	Q14031	1691 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	KIAA1671	Q9BY89	1806 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	PRR33	A8MZF0	331 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	RARB	P10826	455 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	SHMT1	P34896	483 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	TFCP2	Q12800	502 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	RAB3GAP1	Q15042	981 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	KCNA10	Q16322	511 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	TATDN1	Q6P1N9	297 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	ZNF710	Q8N1W2	664 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	SPRYD3	Q8NCJ5	442 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	TOX2	Q96NM4	488 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	IL23A	Q9NPF7	189 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	CEP126	Q9P2H0	1117 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	MICAL3	Q7RTP6	2002 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	SCN10A	Q9Y5Y9	1956 aa		10.12	□□□□□ -0.79
LSM2-210	ENST00000470086	ASTN1	O14525	1302 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	DCDC2C	A8MYV0	355 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	CD4	P01730	458 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	IL9	P15248	144 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	ARID4A	P29374	1257 aa	Predicted RBP	10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	CCL23	P55773	120 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	TMEM132B	Q14DG7	1078 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	ZNF792	Q3KQV3	632 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	RNF180	Q86T96	592 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	NCAPG2	Q86XI2	1143 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	SLF2	Q8IX21	1173 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	SPATA5	Q8NB90	893 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	SCLY	Q96I15	445 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	FGD4	Q96M96	766 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	SNRK	Q9NRH2	765 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	RAI14	Q9P0K7	980 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	MSRA	Q9UJ68	235 aa		10.11	□□□□□ -0.79
LSM2-210	ENST00000470086	GRIN2D	O15399	1336 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	SNAI1	O95863	264 aa	Predicted RBP	10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	ASGR1	P07306	291 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	POU3F3	P20264	500 aa	Predicted RBP	10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	IL15	P40933	162 aa	Predicted RBP	10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	TTLL4	Q14679	1199 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	SEPT2	Q15019	361 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	SHCBP1	Q8NEM2	672 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	PRSS33	Q8NF86	280 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	GDPD5	Q8WTR4	605 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	TINF2	Q9BSI4	451 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	DHX36	Q9H2U1	1008 aa	Known RBP	10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	FBXO28	Q9NVF7	368 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	DDX49	Q9Y6V7	483 aa	Known RBP	10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	ZDBF2	Q9HCK1	2354 aa		10.1	□□□□□ -0.79
LSM2-210	ENST00000470086	RALGAPA2	Q2PPJ7	1873 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	LCHN	A4D1U4	455 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	RGS20	O76081	388 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	AKR1A1	P14550	325 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	PLCB2	Q00722	1185 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	TAP1	Q03518	808 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	GRB10	Q13322	594 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	DSG2	Q14126	1118 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	PLS1	Q14651	629 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	TANGO6	Q9C0B7	1094 aa		10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	PIH1D3	Q9NQM4	214 aa	Known RBP	10.09	□□□□□ -0.79
LSM2-210	ENST00000470086	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.08	□□□□□ -0.8
LSM2-210	ENST00000470086	CYP2E1	P05181	493 aa	Predicted RBP	10.08	□□□□□ -0.8
LSM2-210	ENST00000470086	CST5	P28325	142 aa	Predicted RBP	10.08	□□□□□ -0.8
LSM2-210	ENST00000470086	PLCD1	P51178	756 aa		10.08	□□□□□ -0.8

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