RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 NEDD1Q8NHV4 660 aa16.08■□□□□ 0.16
EFNA1-203ENST00000469878 MKL1Q969V6 931 aa16.08■□□□□ 0.16
EFNA1-203ENST00000469878 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
EFNA1-203ENST00000469878 TEX13BQ9BXU2 312 aa16.08■□□□□ 0.16
EFNA1-203ENST00000469878 LNPKQ9C0E8 428 aa16.08■□□□□ 0.16
EFNA1-203ENST00000469878 RAVER2Q9HCJ3 691 aaKnown RBP16.08■□□□□ 0.16
EFNA1-203ENST00000469878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
EFNA1-203ENST00000469878 A0A1W2PPC1 479 aa16.07■□□□□ 0.16
EFNA1-203ENST00000469878 BMP8BP34820 402 aa16.07■□□□□ 0.16
EFNA1-203ENST00000469878 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
EFNA1-203ENST00000469878 PDE4BQ07343 736 aa16.07■□□□□ 0.16
EFNA1-203ENST00000469878 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
EFNA1-203ENST00000469878 GMCL1P1Q8NEA9 526 aa16.07■□□□□ 0.16
EFNA1-203ENST00000469878 TINF2Q9BSI4 451 aa16.07■□□□□ 0.16
EFNA1-203ENST00000469878 SLC5A4Q9NY91 659 aa16.07■□□□□ 0.16
EFNA1-203ENST00000469878 RTP1P59025 263 aa16.06■□□□□ 0.16
EFNA1-203ENST00000469878 B4GALNT3Q6L9W6 998 aa16.06■□□□□ 0.16
EFNA1-203ENST00000469878 PRPF38AQ8NAV1 312 aaKnown RBP16.06■□□□□ 0.16
EFNA1-203ENST00000469878 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
EFNA1-203ENST00000469878 EVI5LQ96CN4 794 aa16.06■□□□□ 0.16
EFNA1-203ENST00000469878 SLC38A10Q9HBR0 1119 aa16.06■□□□□ 0.16
EFNA1-203ENST00000469878 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
EFNA1-203ENST00000469878 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
EFNA1-203ENST00000469878 IGHDP01880 384 aa16.05■□□□□ 0.16
EFNA1-203ENST00000469878 ZNF865P0CJ78 1059 aaPredicted RBP16.05■□□□□ 0.16
EFNA1-203ENST00000469878 BMP3P12645 472 aa16.05■□□□□ 0.16
EFNA1-203ENST00000469878 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
EFNA1-203ENST00000469878 LRRC41Q15345 812 aa16.05■□□□□ 0.16
EFNA1-203ENST00000469878 ZNF589Q86UQ0 364 aaPredicted RBP16.05■□□□□ 0.16
EFNA1-203ENST00000469878 FGD4Q96M96 766 aa16.05■□□□□ 0.16
EFNA1-203ENST00000469878 UBE2OQ9C0C9 1292 aaKnown RBP16.05■□□□□ 0.16
EFNA1-203ENST00000469878 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
EFNA1-203ENST00000469878 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
EFNA1-203ENST00000469878 LCTP09848 1927 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 DNAJC25-GNG10A0A024R161 153 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 TMEM232C9JQI7 657 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 KBTBD13C9JR72 458 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 PGK1P00558 417 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 COPB2P35606 906 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 ADCYAP1R1P41586 468 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 SNAP25P60880 206 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
EFNA1-203ENST00000469878 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 HOMER2Q9NSB8 354 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 FEM1BQ9UK73 627 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 ATP11BQ9Y2G3 1177 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 LRRC37A2A6NM11 1700 aa16.04■□□□□ 0.16
EFNA1-203ENST00000469878 ZNF536O15090 1300 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 ATP2A1O14983 1001 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 ADCY6O43306 1168 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 ZBED4O75132 1171 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 SNAI1O95863 264 aaPredicted RBP16.03■□□□□ 0.16
EFNA1-203ENST00000469878 SLC3A2P08195 630 aaKnown RBP16.03■□□□□ 0.16
EFNA1-203ENST00000469878 MCCP23508 829 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 KCTD1Q719H9 257 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 TDHQ8IZJ6 230 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 ARRDC4Q8NCT1 418 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 HELLSQ9NRZ9 838 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 SYNPO2Q9UMS6 1093 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
EFNA1-203ENST00000469878 DNAH12Q6ZR08 3092 aa16.03■□□□□ 0.16
EFNA1-203ENST00000469878 RARBP10826 455 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 SLC1A4P43007 532 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 HAND2P61296 217 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 SNX17Q15036 470 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 Q7L0L9 218 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 DDX11Q96FC9 970 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 AGBL1Q96MI9 1066 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 ANAPC4Q9UJX5 808 aa16.02■□□□□ 0.16
EFNA1-203ENST00000469878 ZHX1Q9UKY1 873 aaPredicted RBP16.02■□□□□ 0.16
EFNA1-203ENST00000469878 DDX49Q9Y6V7 483 aaKnown RBP16.02■□□□□ 0.16
EFNA1-203ENST00000469878 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 TRIM6-TRIM34B2RNG4 842 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 RANBP6O60518 1105 aaKnown RBP16.01■□□□□ 0.15
EFNA1-203ENST00000469878 ADAMTS4O75173 837 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 FGAP02671 866 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 HSPD1P10809 573 aaKnown RBP16.01■□□□□ 0.15
EFNA1-203ENST00000469878 STAT2P52630 851 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 MCMDC2Q4G0Z9 681 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
EFNA1-203ENST00000469878 SH3RF1Q7Z6J0 888 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 RILPL2Q969X0 211 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 GMCL1Q96IK5 515 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 PRDM5Q9NQX1 630 aaPredicted RBP16.01■□□□□ 0.15
EFNA1-203ENST00000469878 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 CTDP1Q9Y5B0 961 aaPredicted RBP16.01■□□□□ 0.15
EFNA1-203ENST00000469878 LAMA4Q16363 1823 aa16.01■□□□□ 0.15
EFNA1-203ENST00000469878 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
EFNA1-203ENST00000469878 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
EFNA1-203ENST00000469878 ORC4O43929 436 aa16■□□□□ 0.15
EFNA1-203ENST00000469878 FGRP09769 529 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms