RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 APPP05067 770 aa14.68□□□□□ -0.06
HDAC3-204ENST00000469207 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
HDAC3-204ENST00000469207 SEMA6BQ9H3T3 888 aa14.68□□□□□ -0.06
HDAC3-204ENST00000469207 CHMP4BQ9H444 224 aaKnown RBP14.68□□□□□ -0.06
HDAC3-204ENST00000469207 DCTPP1Q9H773 170 aa14.68□□□□□ -0.06
HDAC3-204ENST00000469207 DIS3Q9Y2L1 958 aaKnown RBP14.68□□□□□ -0.06
HDAC3-204ENST00000469207 MYH7P12883 1935 aa14.68□□□□□ -0.06
HDAC3-204ENST00000469207 EYSQ5T1H1 3165 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 IGKV6D-41A0A0C4DH26 115 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 MYADML2A6NDP7 307 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 GPAA1O43292 621 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 ADCY6O43306 1168 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 ADAMTS4O75173 837 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 C1orf53Q5VUE5 145 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 RNF180Q86T96 592 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 ZNF444Q8N0Y2 327 aaPredicted RBP14.67□□□□□ -0.06
HDAC3-204ENST00000469207 LRRC47Q8N1G4 583 aaKnown RBP14.67□□□□□ -0.06
HDAC3-204ENST00000469207 PRPF38AQ8NAV1 312 aaKnown RBP14.67□□□□□ -0.06
HDAC3-204ENST00000469207 OTUD7AQ8TE49 926 aaPredicted RBP14.67□□□□□ -0.06
HDAC3-204ENST00000469207 APPBP2Q92624 585 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 KIFC2Q96AC6 838 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 DDX11Q96FC9 970 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 CEP95Q96GE4 821 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 CDX2Q99626 313 aaPredicted RBP14.67□□□□□ -0.06
HDAC3-204ENST00000469207 PLXNA1Q9UIW2 1896 aa14.67□□□□□ -0.06
HDAC3-204ENST00000469207 CLTBP09497 229 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 AKR1A1P14550 325 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 IFNL3Q8IZI9 196 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 COL25A1Q9BXS0 654 aaPredicted RBP14.66□□□□□ -0.06
HDAC3-204ENST00000469207 TEX13BQ9BXU2 312 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 TTYH1Q9H313 450 aaPredicted RBP14.66□□□□□ -0.06
HDAC3-204ENST00000469207 INCENPQ9NQS7 918 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 NRBP1Q9UHY1 535 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 ZHX1Q9UKY1 873 aaPredicted RBP14.66□□□□□ -0.06
HDAC3-204ENST00000469207 CNPY2Q9Y2B0 182 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 TACC3Q9Y6A5 838 aa14.66□□□□□ -0.06
HDAC3-204ENST00000469207 GREB1LQ9C091 1923 aaPredicted RBP14.65□□□□□ -0.06
HDAC3-204ENST00000469207 DNAJC25-GNG10A0A024R161 153 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 PATL2C9JE40 543 aaKnown RBP14.65□□□□□ -0.06
HDAC3-204ENST00000469207 ZBED4O75132 1171 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 RAG1P15918 1043 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 TDO2P48775 406 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 ACLYP53396 1101 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 FAAP100Q0VG06 881 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 KCNA10Q16322 511 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 GIMAP6Q6P9H5 292 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 KLHDC9Q8NEP7 349 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 MYLIPQ8WY64 445 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 MKL1Q969V6 931 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 FGD4Q96M96 766 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 TMEM39AQ9NV64 488 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 MTMR4Q9NYA4 1195 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 DDX49Q9Y6V7 483 aaKnown RBP14.65□□□□□ -0.06
HDAC3-204ENST00000469207 SYNRGQ9UMZ2 1314 aa14.65□□□□□ -0.06
HDAC3-204ENST00000469207 PTGS1P23219 599 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 SNAP25P60880 206 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 CNTN2Q02246 1040 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 CCSAPQ6IQ19 270 aaPredicted RBP14.64□□□□□ -0.07
HDAC3-204ENST00000469207 MAMDC4Q6UXC1 1216 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC3-204ENST00000469207 SLC38A10Q9HBR0 1119 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 STARD7Q9NQZ5 370 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 HOMER2Q9NSB8 354 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 FAM184BQ9ULE4 1060 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
HDAC3-204ENST00000469207 ROBO3Q96MS0 1386 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 CDH23Q9H251 3354 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 KIAA0355O15063 1070 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 COPB2P35606 906 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 ACVR2BQ13705 512 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 SLFN13Q68D06 897 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.63□□□□□ -0.07
HDAC3-204ENST00000469207 CTDP1Q9Y5B0 961 aaPredicted RBP14.63□□□□□ -0.07
HDAC3-204ENST00000469207 SYNGAP1Q96PV0 1343 aa14.63□□□□□ -0.07
HDAC3-204ENST00000469207 TMEM232C9JQI7 657 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 ATP2A1O14983 1001 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 TTLL1O95922 423 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 TFAP4Q01664 338 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 CCDC144BQ3MJ40 725 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 CCDC129Q6ZRS4 1044 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 NEDD1Q8NHV4 660 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 PI4K2BQ8TCG2 481 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 VTI1AQ96AJ9 217 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 RNPC3Q96LT9 517 aaKnown RBP14.62□□□□□ -0.07
HDAC3-204ENST00000469207 AGBL1Q96MI9 1066 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 TSEN34Q9BSV6 310 aaKnown RBP14.62□□□□□ -0.07
HDAC3-204ENST00000469207 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
HDAC3-204ENST00000469207 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
HDAC3-204ENST00000469207 MYH4Q9Y623 1939 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
HDAC3-204ENST00000469207 NMT2O60551 498 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 DUSP11O75319 330 aaKnown RBP14.61□□□□□ -0.07
HDAC3-204ENST00000469207 ASGR1P07306 291 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 ZFYP08048 801 aaPredicted RBP14.61□□□□□ -0.07
HDAC3-204ENST00000469207 C6orf222P0C671 652 aaPredicted RBP14.61□□□□□ -0.07
HDAC3-204ENST00000469207 TSPY3P0CV98 308 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 TSPY8P0CW00 308 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms