RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 PFKMP08237 780 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 CST5P28325 142 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-202ENST00000469027 KCTD2Q14681 263 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 RABL6Q3YEC7 729 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-202ENST00000469027 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 ANKRD44Q8N8A2 993 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 ACER1Q8TDN7 264 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 SH3RF3Q8TEJ3 882 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-202ENST00000469027 CDK5RAP2Q96SN8 1893 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
TRAIP-202ENST00000469027 H0Y858 1186 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 HERC4Q5GLZ8 1057 aaPredicted RBP13.06□□□□□ -0.32
TRAIP-202ENST00000469027 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 BMP8AQ7Z5Y6 402 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 PHOSPHO2Q8TCD6 241 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 EDAQ92838 391 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 TLR9Q9NR96 1032 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 PALD1Q9ULE6 856 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 IL16Q14005 1332 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 FANCIQ9NVI1 1328 aa13.06□□□□□ -0.32
TRAIP-202ENST00000469027 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 VAMP4O75379 141 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 RGS20O76081 388 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 FBXL6Q8N531 539 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 ZNF384Q8TF68 577 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 TGFBRAP1Q8WUH2 860 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 CNTNAP3BQ96NU0 1288 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 ZBED2Q9BTP6 218 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 CNTNAP3Q9BZ76 1288 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 SIL1Q9H173 461 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
TRAIP-202ENST00000469027 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
TRAIP-202ENST00000469027 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 KMT2BQ9UMN6 2715 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-202ENST00000469027 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 PRR23AA6NEV1 266 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 KDM4AO75164 1064 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 ADORA1P30542 326 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 ZNF792Q3KQV3 632 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 RNF135Q8IUD6 432 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 MIER1Q8N108 512 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 POP1Q99575 1024 aaKnown RBP13.04□□□□□ -0.32
TRAIP-202ENST00000469027 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAIP-202ENST00000469027 DIS3Q9Y2L1 958 aaKnown RBP13.04□□□□□ -0.32
TRAIP-202ENST00000469027 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
TRAIP-202ENST00000469027 B4GALT4O60513 344 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 SLC25A27O95847 323 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 KCNJ6P48051 423 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 BEX3Q00994 111 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 ITGA7Q13683 1181 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 CXCL17Q6UXB2 119 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 DGLUCYQ7Z3D6 616 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 NSUN4Q96CB9 384 aaKnown RBP13.03□□□□□ -0.32
TRAIP-202ENST00000469027 VWCEQ96DN2 955 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 ATG4CQ96DT6 458 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 FSD1Q9BTV5 496 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 SUGCTQ9HAC7 445 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 CABP5Q9NP86 173 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 AATFQ9NY61 560 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAIP-202ENST00000469027 FLT1P17948 1338 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 KMT2EQ8IZD2 1858 aa13.03□□□□□ -0.32
TRAIP-202ENST00000469027 GVINP1Q7Z2Y8 2422 aa13.02□□□□□ -0.32
TRAIP-202ENST00000469027 SCN5AQ14524 2016 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 FLOT1O75955 427 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 GJA9P57773 515 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 ABCB5Q2M3G0 1257 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 NOL8Q76FK4 1167 aaKnown RBP13.02□□□□□ -0.33
TRAIP-202ENST00000469027 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 METTL16Q86W50 562 aaKnown RBP13.02□□□□□ -0.33
TRAIP-202ENST00000469027 AGBL1Q96MI9 1066 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.33
TRAIP-202ENST00000469027 CRBNQ96SW2 442 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
TRAIP-202ENST00000469027 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.33
TRAIP-202ENST00000469027 ATRXP46100 2492 aa13.02□□□□□ -0.33
TRAIP-202ENST00000469027 PROB1E7EW31 1015 aa13.01□□□□□ -0.33
TRAIP-202ENST00000469027 BAG3O95817 575 aa13.01□□□□□ -0.33
TRAIP-202ENST00000469027 PLCG2P16885 1265 aa13.01□□□□□ -0.33
TRAIP-202ENST00000469027 DSG3P32926 999 aa13.01□□□□□ -0.33
TRAIP-202ENST00000469027 VCPP55072 806 aaKnown RBP13.01□□□□□ -0.33
TRAIP-202ENST00000469027 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
TRAIP-202ENST00000469027 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
TRAIP-202ENST00000469027 ACACBO00763 2458 aa13□□□□□ -0.33
TRAIP-202ENST00000469027 ADCY6O43306 1168 aa13□□□□□ -0.33
TRAIP-202ENST00000469027 CABYRO75952 493 aa13□□□□□ -0.33
TRAIP-202ENST00000469027 SNAI1O95863 264 aaPredicted RBP13□□□□□ -0.33
TRAIP-202ENST00000469027 CYP2C9P11712 490 aa13□□□□□ -0.33
TRAIP-202ENST00000469027 ACVR2BQ13705 512 aa13□□□□□ -0.33
TRAIP-202ENST00000469027 CLUL1Q15846 466 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms