RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 TSEN34Q9BSV6 310 aaKnown RBP17.44■□□□□ 0.38
SNED1-209ENST00000469006 TEX13BQ9BXU2 312 aa17.44■□□□□ 0.38
SNED1-209ENST00000469006 STARD7Q9NQZ5 370 aa17.44■□□□□ 0.38
SNED1-209ENST00000469006 GREB1LQ9C091 1923 aaPredicted RBP17.44■□□□□ 0.38
SNED1-209ENST00000469006 FAAP100Q0VG06 881 aa17.43■□□□□ 0.38
SNED1-209ENST00000469006 SNRNP48Q6IEG0 339 aaKnown RBP17.43■□□□□ 0.38
SNED1-209ENST00000469006 ANKRD33Q7Z3H0 272 aa17.43■□□□□ 0.38
SNED1-209ENST00000469006 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
SNED1-209ENST00000469006 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNED1-209ENST00000469006 ARPP21Q9UBL0 812 aaPredicted RBP17.43■□□□□ 0.38
SNED1-209ENST00000469006 ZHX1Q9UKY1 873 aaPredicted RBP17.43■□□□□ 0.38
SNED1-209ENST00000469006 SYNGAP1Q96PV0 1343 aa17.43■□□□□ 0.38
SNED1-209ENST00000469006 DCDC2CA8MYV0 355 aa17.42■□□□□ 0.38
SNED1-209ENST00000469006 DNAJB2P25686 324 aa17.42■□□□□ 0.38
SNED1-209ENST00000469006 NUP133Q8WUM0 1156 aa17.42■□□□□ 0.38
SNED1-209ENST00000469006 TOX2Q96NM4 488 aa17.42■□□□□ 0.38
SNED1-209ENST00000469006 PUS7LQ9H0K6 701 aaKnown RBP17.42■□□□□ 0.38
SNED1-209ENST00000469006 FAM184BQ9ULE4 1060 aa17.42■□□□□ 0.38
SNED1-209ENST00000469006 MYADML2A6NDP7 307 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 MOXD2PA6NHM9 499 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 SNAI1O95863 264 aaPredicted RBP17.41■□□□□ 0.38
SNED1-209ENST00000469006 GRIN2CQ14957 1233 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 KLHDC9Q8NEP7 349 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 ZBTB40Q9NUA8 1239 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 DDX19BQ9UMR2 479 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 RIPK3Q9Y572 518 aa17.41■□□□□ 0.38
SNED1-209ENST00000469006 DNAJC25-GNG10A0A024R161 153 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.4■□□□□ 0.38
SNED1-209ENST00000469006 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.4■□□□□ 0.38
SNED1-209ENST00000469006 NDUFB10O96000 172 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 RASA1P20936 1047 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 KCNA10Q16322 511 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 CCSAPQ6IQ19 270 aaPredicted RBP17.4■□□□□ 0.38
SNED1-209ENST00000469006 MAMDC4Q6UXC1 1216 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 STK11IPQ8N1F8 1099 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
SNED1-209ENST00000469006 TBX21Q9UL17 535 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 COG6Q9Y2V7 657 aa17.4■□□□□ 0.38
SNED1-209ENST00000469006 F5H6K3 240 aa17.39■□□□□ 0.37
SNED1-209ENST00000469006 DUSP11O75319 330 aaKnown RBP17.39■□□□□ 0.37
SNED1-209ENST00000469006 TIMP1P01033 207 aa17.39■□□□□ 0.37
SNED1-209ENST00000469006 KLRC3Q07444 240 aa17.39■□□□□ 0.37
SNED1-209ENST00000469006 CPXCR1Q8N123 301 aa17.39■□□□□ 0.37
SNED1-209ENST00000469006 USP38Q8NB14 1042 aa17.39■□□□□ 0.37
SNED1-209ENST00000469006 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
SNED1-209ENST00000469006 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNED1-209ENST00000469006 NYAP2Q9P242 653 aa17.39■□□□□ 0.37
SNED1-209ENST00000469006 ADCY6O43306 1168 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 C6orf222P0C671 652 aaPredicted RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 CST5P28325 142 aaPredicted RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 IRX5P78411 483 aaPredicted RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 ACVR2BQ13705 512 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 SBK1Q52WX2 424 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 PRPF38AQ8NAV1 312 aaKnown RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 SYMPKQ92797 1274 aaKnown RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 TIFAQ96CG3 184 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 STRBPQ96SI9 672 aaKnown RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 ZNF576Q9H609 170 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 PRDM6Q9NQX0 595 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
SNED1-209ENST00000469006 MROH7Q68CQ1 1323 aa17.38■□□□□ 0.37
SNED1-209ENST00000469006 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 MINDY4BA8MYZ0 360 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 ATP2A1O14983 1001 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 ZBED4O75132 1171 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 MFSD5Q6N075 450 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 KIFC2Q96AC6 838 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 FGD4Q96M96 766 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 RAVER2Q9HCJ3 691 aaKnown RBP17.37■□□□□ 0.37
SNED1-209ENST00000469006 ELP1O95163 1332 aa17.37■□□□□ 0.37
SNED1-209ENST00000469006 IGKV6D-41A0A0C4DH26 115 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 ASGR1P07306 291 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 CDK7P50613 346 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 PPIGQ13427 754 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNED1-209ENST00000469006 CCDC144BQ3MJ40 725 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 CCDC174Q6PII3 467 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNED1-209ENST00000469006 ANKRD35Q8N283 1001 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 PCSK9Q8NBP7 692 aaKnown RBP17.36■□□□□ 0.37
SNED1-209ENST00000469006 VTI1AQ96AJ9 217 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 LRRCC1Q9C099 1032 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 UPF3AQ9H1J1 476 aaKnown RBP17.36■□□□□ 0.37
SNED1-209ENST00000469006 CHMP4BQ9H444 224 aaKnown RBP17.36■□□□□ 0.37
SNED1-209ENST00000469006 SLC38A10Q9HBR0 1119 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 CLIP2Q9UDT6 1046 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 MYH4Q9Y623 1939 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 MCM3APO60318 1980 aa17.36■□□□□ 0.37
SNED1-209ENST00000469006 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
SNED1-209ENST00000469006 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
SNED1-209ENST00000469006 GJA9P57773 515 aa17.35■□□□□ 0.37
SNED1-209ENST00000469006 TJAP1Q5JTD0 557 aa17.35■□□□□ 0.37
SNED1-209ENST00000469006 TMEM240Q5SV17 173 aa17.35■□□□□ 0.37
SNED1-209ENST00000469006 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms