RNA–Protein interactions for RNA: ENST00000468672.5

TRAF3IP3-208, Transcript of TRAF3 interacting protein 3, human

TSL 4

Gene TRAF3IP3, Length 570 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAF3IP3-208	ENST00000468672	PARK7	Q99497	189 aa	Known RBP	13.68	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	PTPN18	Q99952	460 aa		13.68	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SLF1	Q9BQI6	1058 aa		13.68	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	LARP6	Q9BRS8	491 aa	Known RBP	13.68	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	HOXC10	Q9NYD6	342 aa		13.68	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	CPLX1	O14810	134 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	GOLGA8H	P0CJ92	632 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	DSG3	P32926	999 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	STK3	Q13188	491 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	ME3	Q16798	604 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SYDE2	Q5VT97	1194 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	TMTC3	Q6ZXV5	915 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	FAM43A	Q8N2R8	423 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	STAG2	Q8N3U4	1231 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	ZIC5	Q96T25	663 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SPZ1	Q9BXG8	430 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	PPP1R9A	Q9ULJ8	1098 aa		13.67	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	CDKL5	O76039	1030 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	CD2BP2	O95400	341 aa	Known RBP	13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	CDC27	P30260	824 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	CCT2	P78371	535 aa	Known RBP	13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	TAF1C	Q15572	869 aa	Predicted RBP	13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	TTBK2	Q6IQ55	1244 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	LBX2	Q6XYB7	198 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	HSCB	Q8IWL3	235 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	MB21D1	Q8N884	522 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	GTF3C6	Q969F1	213 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	FBXO28	Q9NVF7	368 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SMCHD1	A6NHR9	2005 aa		13.66	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	PLEKHA8P1	O95397	391 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	LARGE1	O95461	756 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	ADD1	P35611	737 aa	Known RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	GCLC	P48506	637 aa	Predicted RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	HERVK_113	P62684	666 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SCRN1	Q12765	414 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	KIFC2	Q96AC6	838 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	TMX3	Q96JJ7	454 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	P2RX7	Q99572	595 aa	Known RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	UBA5	Q9GZZ9	404 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	RIOX1	Q9H6W3	641 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	ZFYVE28	Q9HCC9	887 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	NCOA5	Q9HCD5	579 aa	Known RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	RBM27	Q9P2N5	1060 aa	Known RBP	13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	PNMA2	Q9UL42	364 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	PRR12	Q9ULL5	1215 aa		13.65	□□□□□ -0.22
TRAF3IP3-208	ENST00000468672	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672		K7ELQ4	463 aa	Predicted RBP	13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CA12	O43570	354 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	ZBED4	O75132	1171 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	IFNAR1	P17181	557 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	SLC16A2	P36021	539 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	MAP2K1	Q02750	393 aa	Predicted RBP	13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	ADGRF4	Q8IZF3	695 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	SRBD1	Q8N5C6	995 aa	Known RBP	13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	ATG4C	Q96DT6	458 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	ADAMTS5	Q9UNA0	930 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CNTNAP5	Q8WYK1	1306 aa		13.64	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	MGAM	O43451	1857 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	VWA5A	O00534	786 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CYP2C8	P10632	490 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	OAZ1	P54368	228 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	AKAP17A	Q02040	695 aa	Known RBP	13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	TRAF1	Q13077	416 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	BECN1	Q14457	450 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	NTRK3	Q16288	839 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CCDC83	Q8IWF9	413 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	TRIM22	Q8IYM9	498 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	NECAB1	Q8N987	351 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	MTMR8	Q96EF0	704 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	RRP36	Q96EU6	259 aa	Known RBP	13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	LLPH	Q9BRT6	129 aa	Known RBP	13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CFHR5	Q9BXR6	569 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	RNF26	Q9BY78	433 aa	Predicted RBP	13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	RANBP17	Q9H2T7	1088 aa	Known RBP	13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CPVL	Q9H3G5	476 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	JMJD4	Q9H9V9	463 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	SLC38A10	Q9HBR0	1119 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	VAT1L	Q9HCJ6	419 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	SEC63	Q9UGP8	760 aa	Known RBP	13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	RABGAP1	Q9Y3P9	1069 aa		13.63	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CYTH3	O43739	400 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	ANP32A	P39687	249 aa	Known RBP	13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	SSRP1	Q08945	709 aa	Known RBP	13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	FUT2	Q10981	343 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CDC37	Q16543	378 aa	Predicted RBP	13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	NBPF11	Q86T75	865 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	CCDC82	Q8N4S0	544 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	DNAJC5G	Q8N7S2	189 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	BEGAIN	Q9BUH8	593 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	SAGE1	Q9NXZ1	904 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	ADGRA2	Q96PE1	1338 aa		13.62	□□□□□ -0.23
TRAF3IP3-208	ENST00000468672	STK36	Q9NRP7	1315 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms