RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 KCTD2Q14681 263 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
COMMD3-206ENST00000468179 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 ESR2Q92731 530 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 INCENPQ9NQS7 918 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 RAD50Q92878 1312 aa17.24■□□□□ 0.35
COMMD3-206ENST00000468179 FARP2O94887 1054 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-206ENST00000468179 STAT2P52630 851 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 OAZ1P54368 228 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 HAND2P61296 217 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 CACNB2Q08289 660 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-206ENST00000468179 TRIM32Q13049 653 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 IKQ13123 557 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-206ENST00000468179 CCL14Q16627 93 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 OLFML2BQ68BL8 750 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 TTC14Q96N46 770 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 MMP19Q99542 508 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 IL17RBQ9NRM6 502 aa17.23■□□□□ 0.35
COMMD3-206ENST00000468179 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-206ENST00000468179 DOCK3Q8IZD9 2030 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 TMEM232C9JQI7 657 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 MSCO60682 206 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 PLA2G6O60733 806 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
COMMD3-206ENST00000468179 GSPT1P15170 499 aaKnown RBP17.22■□□□□ 0.35
COMMD3-206ENST00000468179 MCCP23508 829 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 NOVP48745 357 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 RCSD1Q6JBY9 416 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 REPS2Q8NFH8 660 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 HTTP42858 3142 aa17.22■□□□□ 0.35
COMMD3-206ENST00000468179 SNRNP48Q6IEG0 339 aaKnown RBP17.21■□□□□ 0.35
COMMD3-206ENST00000468179 CENPQQ7L2Z9 268 aaPredicted RBP17.21■□□□□ 0.35
COMMD3-206ENST00000468179 IQCA1Q86XH1 822 aa17.21■□□□□ 0.35
COMMD3-206ENST00000468179 NPLOC4Q8TAT6 608 aa17.21■□□□□ 0.35
COMMD3-206ENST00000468179 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
COMMD3-206ENST00000468179 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
COMMD3-206ENST00000468179 SLC38A10Q9HBR0 1119 aa17.21■□□□□ 0.35
COMMD3-206ENST00000468179 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
COMMD3-206ENST00000468179 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
COMMD3-206ENST00000468179 NMT2O60551 498 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 NECAB2Q7Z6G3 386 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 UBE2Q1Q7Z7E8 422 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 CPXCR1Q8N123 301 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 DPF3Q92784 378 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 KRT23Q9C075 422 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 OGDHLQ9ULD0 1010 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 TACC3Q9Y6A5 838 aa17.21■□□□□ 0.34
COMMD3-206ENST00000468179 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 PLXNB2O15031 1838 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 COBLO75128 1261 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 CHMLP26374 656 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 CNGA1P29973 690 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 TBC1D10CQ8IV04 446 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 CHST13Q8NET6 341 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 FLRT1Q9NZU1 646 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 RLFQ13129 1914 aa17.2■□□□□ 0.34
COMMD3-206ENST00000468179 CCND3P30281 292 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-206ENST00000468179 CYP2C19P33261 490 aa17.19■□□□□ 0.34
COMMD3-206ENST00000468179 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
COMMD3-206ENST00000468179 CCDC96Q2M329 555 aa17.19■□□□□ 0.34
COMMD3-206ENST00000468179 TKFCQ3LXA3 575 aa17.19■□□□□ 0.34
COMMD3-206ENST00000468179 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
COMMD3-206ENST00000468179 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-206ENST00000468179 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
COMMD3-206ENST00000468179 NBPF3Q9H094 633 aa17.19■□□□□ 0.34
COMMD3-206ENST00000468179 RAVER2Q9HCJ3 691 aaKnown RBP17.19■□□□□ 0.34
COMMD3-206ENST00000468179 KCTD1Q719H9 257 aa17.18■□□□□ 0.34
COMMD3-206ENST00000468179 MSL3Q8N5Y2 521 aaKnown RBP17.18■□□□□ 0.34
COMMD3-206ENST00000468179 MAML3Q96JK9 1138 aa17.18■□□□□ 0.34
COMMD3-206ENST00000468179 DDX20Q9UHI6 824 aaKnown RBP17.18■□□□□ 0.34
COMMD3-206ENST00000468179 PNMA2Q9UL42 364 aa17.18■□□□□ 0.34
COMMD3-206ENST00000468179 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
COMMD3-206ENST00000468179 NR2E3Q9Y5X4 410 aa17.18■□□□□ 0.34
COMMD3-206ENST00000468179 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
COMMD3-206ENST00000468179 KDM4AO75164 1064 aa17.17■□□□□ 0.34
COMMD3-206ENST00000468179 IGHA2P01877 340 aa17.17■□□□□ 0.34
COMMD3-206ENST00000468179 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
COMMD3-206ENST00000468179 TRDNQ13061 729 aa17.17■□□□□ 0.34
COMMD3-206ENST00000468179 ZNF792Q3KQV3 632 aa17.17■□□□□ 0.34
COMMD3-206ENST00000468179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD3-206ENST00000468179 ANKRD35Q8N283 1001 aa17.17■□□□□ 0.34
COMMD3-206ENST00000468179 PAWRQ96IZ0 340 aaKnown RBP17.17■□□□□ 0.34
COMMD3-206ENST00000468179 MYH4Q9Y623 1939 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 NEDD4P46934 1319 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 PGK2P07205 417 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 CYBAP13498 195 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 LHX8Q68G74 356 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-206ENST00000468179 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 C11orf49Q9H6J7 331 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 ACAD9Q9H845 621 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 KAT14Q9H8E8 782 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms