RNA–Protein interactions for RNA: ENST00000467722.2

SPECC1-208, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 2

Gene SPECC1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-208ENST00000467722 TBX21Q9UL17 535 aa28.91■■■□□ 2.22
SPECC1-208ENST00000467722 SYNGAP1Q96PV0 1343 aa28.91■■■□□ 2.22
SPECC1-208ENST00000467722 NCOR1O75376 2440 aa28.9■■■□□ 2.22
SPECC1-208ENST00000467722 DCDC2CA8MYV0 355 aa28.9■■■□□ 2.22
SPECC1-208ENST00000467722 APBB1O00213 710 aa28.9■■■□□ 2.22
SPECC1-208ENST00000467722 PANK1Q8TE04 598 aa28.9■■■□□ 2.22
SPECC1-208ENST00000467722 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.9■■■□□ 2.22
SPECC1-208ENST00000467722 DNAJC25-GNG10A0A024R161 153 aa28.89■■■□□ 2.22
SPECC1-208ENST00000467722 SNAI1O95863 264 aaPredicted RBP28.89■■■□□ 2.22
SPECC1-208ENST00000467722 TIMP1P01033 207 aa28.89■■■□□ 2.22
SPECC1-208ENST00000467722 CHGBP05060 677 aa28.89■■■□□ 2.22
SPECC1-208ENST00000467722 MAMDC4Q6UXC1 1216 aa28.89■■■□□ 2.22
SPECC1-208ENST00000467722 TEX13BQ9BXU2 312 aa28.89■■■□□ 2.22
SPECC1-208ENST00000467722 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.89■■■□□ 2.22
SPECC1-208ENST00000467722 REV3LO60673 3130 aa28.89■■■□□ 2.21
SPECC1-208ENST00000467722 KCNA10Q16322 511 aa28.88■■■□□ 2.21
SPECC1-208ENST00000467722 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.88■■■□□ 2.21
SPECC1-208ENST00000467722 ZNF576Q9H609 170 aa28.88■■■□□ 2.21
SPECC1-208ENST00000467722 FAM184BQ9ULE4 1060 aa28.88■■■□□ 2.21
SPECC1-208ENST00000467722 MYADML2A6NDP7 307 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 ATP5JP18859 108 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 CST5P28325 142 aaPredicted RBP28.87■■■□□ 2.21
SPECC1-208ENST00000467722 UBE3CQ15386 1083 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 TJAP1Q5JTD0 557 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 CTR9Q6PD62 1173 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 TIFAQ96CG3 184 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 DDRGK1Q96HY6 314 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 SLF1Q9BQI6 1058 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 BOLA2Q9H3K6 86 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 BDP1A6H8Y1 2624 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 GBF1Q92538 1859 aa28.87■■■□□ 2.21
SPECC1-208ENST00000467722 RAD21O60216 631 aa28.86■■■□□ 2.21
SPECC1-208ENST00000467722 DUSP11O75319 330 aaKnown RBP28.86■■■□□ 2.21
SPECC1-208ENST00000467722 SNRNP48Q6IEG0 339 aaKnown RBP28.86■■■□□ 2.21
SPECC1-208ENST00000467722 MFSD5Q6N075 450 aa28.86■■■□□ 2.21
SPECC1-208ENST00000467722 NUP88Q99567 741 aaPredicted RBP28.86■■■□□ 2.21
SPECC1-208ENST00000467722 HAUS7Q99871 368 aa28.86■■■□□ 2.21
SPECC1-208ENST00000467722 RIPK3Q9Y572 518 aa28.86■■■□□ 2.21
SPECC1-208ENST00000467722 SLC4A4Q9Y6R1 1079 aa28.86■■■□□ 2.21
SPECC1-208ENST00000467722 MROH7Q68CQ1 1323 aa28.86■■■□□ 2.21
SPECC1-208ENST00000467722 ZNF467Q7Z7K2 595 aaPredicted RBP28.85■■■□□ 2.21
SPECC1-208ENST00000467722 SIRT2Q8IXJ6 389 aa28.85■■■□□ 2.21
SPECC1-208ENST00000467722 ZHX1Q9UKY1 873 aaPredicted RBP28.85■■■□□ 2.21
SPECC1-208ENST00000467722 ELP1O95163 1332 aa28.85■■■□□ 2.21
SPECC1-208ENST00000467722 ATP2A1O14983 1001 aa28.84■■■□□ 2.21
SPECC1-208ENST00000467722 ADCY6O43306 1168 aa28.84■■■□□ 2.21
SPECC1-208ENST00000467722 CDK7P50613 346 aa28.84■■■□□ 2.21
SPECC1-208ENST00000467722 RASIP1Q5U651 963 aa28.84■■■□□ 2.21
SPECC1-208ENST00000467722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.84■■■□□ 2.21
SPECC1-208ENST00000467722 C16orf59Q7L2K0 433 aa28.84■■■□□ 2.21
SPECC1-208ENST00000467722 RPAP2Q8IXW5 612 aaPredicted RBP28.84■■■□□ 2.21
SPECC1-208ENST00000467722 ARPP21Q9UBL0 812 aaPredicted RBP28.84■■■□□ 2.21
SPECC1-208ENST00000467722 IRX5P78411 483 aaPredicted RBP28.83■■■□□ 2.21
SPECC1-208ENST00000467722 DDX11Q96FC9 970 aa28.83■■■□□ 2.21
SPECC1-208ENST00000467722 GLT1D1Q96MS3 346 aa28.83■■■□□ 2.21
SPECC1-208ENST00000467722 UPF3AQ9H1J1 476 aaKnown RBP28.83■■■□□ 2.21
SPECC1-208ENST00000467722 TRANK1O15050 2925 aa28.82■■■□□ 2.2
SPECC1-208ENST00000467722 RAB11FIP3O75154 756 aa28.82■■■□□ 2.2
SPECC1-208ENST00000467722 HMMRO75330 724 aa28.82■■■□□ 2.2
SPECC1-208ENST00000467722 RASA1P20936 1047 aa28.82■■■□□ 2.2
SPECC1-208ENST00000467722 PPIGQ13427 754 aaKnown RBP eCLIP28.82■■■□□ 2.2
SPECC1-208ENST00000467722 TMEM240Q5SV17 173 aa28.82■■■□□ 2.2
SPECC1-208ENST00000467722 FGD4Q96M96 766 aa28.82■■■□□ 2.2
SPECC1-208ENST00000467722 PUS7LQ9H0K6 701 aaKnown RBP28.82■■■□□ 2.2
SPECC1-208ENST00000467722 NDUFB10O96000 172 aa28.81■■■□□ 2.2
SPECC1-208ENST00000467722 ASGR1P07306 291 aa28.81■■■□□ 2.2
SPECC1-208ENST00000467722 ACVR2BQ13705 512 aa28.81■■■□□ 2.2
SPECC1-208ENST00000467722 PRPF38AQ8NAV1 312 aaKnown RBP28.81■■■□□ 2.2
SPECC1-208ENST00000467722 PCSK9Q8NBP7 692 aaKnown RBP28.81■■■□□ 2.2
SPECC1-208ENST00000467722 PBX4Q9BYU1 374 aa28.81■■■□□ 2.2
SPECC1-208ENST00000467722 BCL11AQ9H165 835 aa28.81■■■□□ 2.2
SPECC1-208ENST00000467722 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.81■■■□□ 2.2
SPECC1-208ENST00000467722 NYAP2Q9P242 653 aa28.81■■■□□ 2.2
SPECC1-208ENST00000467722 LRRC37A2A6NM11 1700 aa28.8■■■□□ 2.2
SPECC1-208ENST00000467722 XIRP2A4UGR9 3374 aa28.8■■■□□ 2.2
SPECC1-208ENST00000467722 F5H6K3 240 aa28.8■■■□□ 2.2
SPECC1-208ENST00000467722 C6orf222P0C671 652 aaPredicted RBP28.8■■■□□ 2.2
SPECC1-208ENST00000467722 PBX2P40425 430 aa28.8■■■□□ 2.2
SPECC1-208ENST00000467722 KLRC3Q07444 240 aa28.8■■■□□ 2.2
SPECC1-208ENST00000467722 CCDC174Q6PII3 467 aa28.8■■■□□ 2.2
SPECC1-208ENST00000467722 CSF2RAP15509 400 aa28.79■■■□□ 2.2
SPECC1-208ENST00000467722 GJA9P57773 515 aa28.79■■■□□ 2.2
SPECC1-208ENST00000467722 CCDC144BQ3MJ40 725 aa28.79■■■□□ 2.2
SPECC1-208ENST00000467722 SBK1Q52WX2 424 aa28.79■■■□□ 2.2
SPECC1-208ENST00000467722 FAM126BQ8IXS8 530 aa28.79■■■□□ 2.2
SPECC1-208ENST00000467722 ABHD16BQ9H3Z7 469 aa28.79■■■□□ 2.2
SPECC1-208ENST00000467722 A0A0U1RQG5 324 aaPredicted RBP28.78■■■□□ 2.2
SPECC1-208ENST00000467722 ARVCFO00192 962 aa28.78■■■□□ 2.2
SPECC1-208ENST00000467722 TNFRSF10AO00220 468 aa28.78■■■□□ 2.2
SPECC1-208ENST00000467722 HNRNPUQ00839 825 aaKnown RBP eCLIP28.78■■■□□ 2.2
SPECC1-208ENST00000467722 ZBTB40Q9NUA8 1239 aa28.78■■■□□ 2.2
SPECC1-208ENST00000467722 GRXCR1A8MXD5 290 aa28.77■■■□□ 2.2
SPECC1-208ENST00000467722 AKNAD1Q5T1N1 836 aa28.77■■■□□ 2.2
SPECC1-208ENST00000467722 ZSCAN25Q6NSZ9 544 aa28.77■■■□□ 2.2
SPECC1-208ENST00000467722 PSRC1Q6PGN9 363 aaPredicted RBP28.77■■■□□ 2.2
SPECC1-208ENST00000467722 CPXCR1Q8N123 301 aa28.77■■■□□ 2.2
SPECC1-208ENST00000467722 TMEM199Q8N511 208 aa28.77■■■□□ 2.2
SPECC1-208ENST00000467722 GAS2L1Q99501 681 aaPredicted RBP28.77■■■□□ 2.2
SPECC1-208ENST00000467722 SPC25Q9HBM1 224 aa28.77■■■□□ 2.2
SPECC1-208ENST00000467722 SLC38A10Q9HBR0 1119 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms