RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GJD3Q8N144 294 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 SHMT1P34896 483 aa12.51□□□□□ -0.41
HDAC3-203ENST00000467533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
HDAC3-203ENST00000467533 GRB10Q13322 594 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 GNASQ5JWF2 1037 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 KIAA1755Q5JYT7 1200 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 TTC39AQ5SRH9 613 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 RIOX2Q8IUF8 465 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 SPICE1Q8N0Z3 855 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 WNT8AQ9H1J5 351 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 HDAC5Q9UQL6 1122 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 MCM3APO60318 1980 aa12.5□□□□□ -0.41
HDAC3-203ENST00000467533 SCN5AQ14524 2016 aa12.49□□□□□ -0.41
HDAC3-203ENST00000467533 ADCY6O43306 1168 aa12.49□□□□□ -0.41
HDAC3-203ENST00000467533 COPB2P35606 906 aa12.49□□□□□ -0.41
HDAC3-203ENST00000467533 GJA9P57773 515 aa12.49□□□□□ -0.41
HDAC3-203ENST00000467533 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
HDAC3-203ENST00000467533 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
HDAC3-203ENST00000467533 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
HDAC3-203ENST00000467533 SCLYQ96I15 445 aa12.49□□□□□ -0.41
HDAC3-203ENST00000467533 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
HDAC3-203ENST00000467533 UPF3AQ9H1J1 476 aaKnown RBP12.49□□□□□ -0.41
HDAC3-203ENST00000467533 CACNA1AO00555 2505 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 ZNF536O15090 1300 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 SRGAP3O43295 1099 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
HDAC3-203ENST00000467533 CYP2E1P05181 493 aaPredicted RBP12.48□□□□□ -0.41
HDAC3-203ENST00000467533 CYP7A1P22680 504 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 BEX3Q00994 111 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 TAP1Q03518 808 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 ACVR2BQ13705 512 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 TTLL4Q14679 1199 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 CERS3Q8IU89 383 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 SSH1Q8WYL5 1049 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 SH2D4AQ9H788 454 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 UBE2ZQ9H832 354 aaPredicted RBP12.48□□□□□ -0.41
HDAC3-203ENST00000467533 ARHGEF10LQ9HCE6 1279 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
HDAC3-203ENST00000467533 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
HDAC3-203ENST00000467533 DCXO43602 365 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 ST18O60284 1047 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 PFKMP08237 780 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 ACTN1P12814 892 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 IL9P15248 144 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 STAT3P40763 770 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 PLCD1P51178 756 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 CCDC144BQ3MJ40 725 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 CXCL17Q6UXB2 119 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 PHOX2BQ99453 314 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 TRPV6Q9H1D0 765 aa12.47□□□□□ -0.41
HDAC3-203ENST00000467533 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
HDAC3-203ENST00000467533 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 B4GALT4O60513 344 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
HDAC3-203ENST00000467533 ITGA7Q13683 1181 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 SLC43A3Q8NBI5 491 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 VCPKMTQ9H867 229 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 PIH1D3Q9NQM4 214 aaKnown RBP12.46□□□□□ -0.41
HDAC3-203ENST00000467533 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.41
HDAC3-203ENST00000467533 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
HDAC3-203ENST00000467533 PTPRSQ13332 1948 aa12.46□□□□□ -0.42
HDAC3-203ENST00000467533 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 LPXNO60711 386 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 IDH1O75874 414 aaKnown RBP12.45□□□□□ -0.42
HDAC3-203ENST00000467533 CABYRO75952 493 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 KCNA5P22460 613 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 ZAP70P43403 619 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 ICA1Q05084 483 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 LEXMQ3ZCV2 418 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 CCDC158Q5M9N0 1113 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
HDAC3-203ENST00000467533 NOL8Q76FK4 1167 aaKnown RBP12.45□□□□□ -0.42
HDAC3-203ENST00000467533 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 VWCEQ96DN2 955 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 MEIS3Q99687 375 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 ABHD16BQ9H3Z7 469 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 TMX2Q9Y320 296 aa12.45□□□□□ -0.42
HDAC3-203ENST00000467533 BRWD1Q9NSI6 2320 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 VWA5AO00534 786 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 CTAGE5O15320 804 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 IGSF3O75054 1194 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 FOXK2Q01167 660 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 GABPAQ06546 454 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
HDAC3-203ENST00000467533 HERC6Q8IVU3 1022 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.44□□□□□ -0.42
HDAC3-203ENST00000467533 PHOSPHO2Q8TCD6 241 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 ANKS1AQ92625 1134 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 PPP1R9AQ9ULJ8 1098 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms