RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 UVSSAQ2YD98 709 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 CAPN12Q6ZSI9 719 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 GALNT11Q8NCW6 608 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 CRAMP1Q96RY5 1269 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 RTFDC1Q9BY42 306 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-207ENST00000467273 MUC3BQ9H195 1237 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 TMX4Q9H1E5 349 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-207ENST00000467273 SEPT3Q9UH03 358 aa7.26□□□□□ -1.25
PTCD3-207ENST00000467273 NIP7Q9Y221 180 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTCD3-207ENST00000467273 PPIP5K2O43314 1243 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 ABL1P00519 1130 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 IGFBP4P22692 258 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 CDC25BP30305 580 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 GMPSP49915 693 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 FXR1P51114 621 aaKnown RBP eCLIP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 ZNF157P51786 506 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 CXCL9Q07325 125 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 MTHFSDQ2M296 383 aaKnown RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 INTS3Q68E01 1043 aaKnown RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 FBXO46Q6PJ61 603 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 MORC1Q86VD1 984 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 SHKBP1Q8TBC3 707 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 DPF2Q92785 391 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 RPGRQ92834 1020 aaKnown RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 VTI1AQ96AJ9 217 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 RBM17Q96I25 401 aaKnown RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 ZNF408Q9H9D4 720 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 GBA2Q9HCG7 927 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-207ENST00000467273 ANO2Q9NQ90 1003 aa7.25□□□□□ -1.25
PTCD3-207ENST00000467273 CEMIPQ8WUJ3 1361 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 RBBP6Q7Z6E9 1792 aaKnown RBP7.24□□□□□ -1.25
PTCD3-207ENST00000467273 GNAT3A8MTJ3 354 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 H7C1D1 291 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 CD68P34810 354 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-207ENST00000467273 ZNF211Q13398 564 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-207ENST00000467273 ABI1Q8IZP0 508 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 MYRFLQ96LU7 910 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 CSRNP1Q96S65 589 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 KCNF1Q9H3M0 494 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 KCNK4Q9NYG8 393 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 HDAC9Q9UKV0 1011 aa7.24□□□□□ -1.25
PTCD3-207ENST00000467273 ERVV-1B6SEH8 477 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 SNRPA1P09661 255 aaKnown RBP7.23□□□□□ -1.25
PTCD3-207ENST00000467273 FKBP1BP68106 108 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 KIAA2012Q0VF49 1180 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 AOC3Q16853 763 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 C11orf91Q3C1V1 193 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 OGFOD2Q6N063 350 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 KRT26Q7Z3Y9 468 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 GTF3C2Q8WUA4 911 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-207ENST00000467273 FAM46AQ96IP4 442 aaKnown RBP7.23□□□□□ -1.25
PTCD3-207ENST00000467273 BCL2L13Q9BXK5 485 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 LACRTQ9GZZ8 138 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 CNOT7Q9UIV1 285 aaKnown RBP7.23□□□□□ -1.25
PTCD3-207ENST00000467273 ATP6V0A2Q9Y487 856 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 HTTP42858 3142 aa7.23□□□□□ -1.25
PTCD3-207ENST00000467273 OPLAHO14841 1288 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 EGFRP00533 1210 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 RPS12P25398 132 aaKnown RBP7.22□□□□□ -1.25
PTCD3-207ENST00000467273 SOX18P35713 384 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 NAA30Q147X3 362 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-207ENST00000467273 DUOXA2Q1HG44 320 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 USP48Q86UV5 1035 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 CACTIN-AS1Q8N1I8 211 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 IL17REQ8NFR9 667 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 ZNF296Q8WUU4 475 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-207ENST00000467273 ZNF428Q96B54 188 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 DCPSQ96C86 337 aaKnown RBP7.22□□□□□ -1.25
PTCD3-207ENST00000467273 BIN2Q9UBW5 565 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-207ENST00000467273 ANGEL1Q9UNK9 670 aaKnown RBP7.22□□□□□ -1.25
PTCD3-207ENST00000467273 USP16Q9Y5T5 823 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 A0A0C4DFX4 3053 aa7.22□□□□□ -1.25
PTCD3-207ENST00000467273 ABCC12Q96J65 1359 aa7.21□□□□□ -1.25
PTCD3-207ENST00000467273 SART1O43290 800 aaKnown RBP7.21□□□□□ -1.26
PTCD3-207ENST00000467273 ICMTO60725 284 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 BBOX1O75936 387 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 HMGB1P09429 215 aaKnown RBP7.21□□□□□ -1.26
PTCD3-207ENST00000467273 HMOX1P09601 288 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 MTMR3Q13615 1198 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 KIAA1211Q6ZU35 1233 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 BEND4Q6ZU67 534 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 TMC4Q7Z404 712 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 FAM20CQ8IXL6 584 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
PTCD3-207ENST00000467273 LAMB4A4D0S4 1761 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 PAPPA2Q9BXP8 1791 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 SZT2Q5T011 3432 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 CENPFP49454 3210 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 NUP98P52948 1817 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 WDR64B1ANS9 1081 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 H3BRB1 525 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 DIAPH1O60610 1272 aaKnown RBP7.2□□□□□ -1.26
PTCD3-207ENST00000467273 CDK11BP21127 795 aaKnown RBP7.2□□□□□ -1.26
PTCD3-207ENST00000467273 TM4SF4P48230 202 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 DPP8Q6V1X1 898 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-207ENST00000467273 RASAL3Q86YV0 1011 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 TREML1Q86YW5 311 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 CLEC10AQ8IUN9 316 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 SP8Q8IXZ3 490 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms