RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 MKL1Q969V6 931 aa10.97□□□□□ -0.65
APOBEC1-202ENST00000467171 ZBED3Q96IU2 234 aaPredicted RBP10.97□□□□□ -0.65
APOBEC1-202ENST00000467171 SLC4A5Q9BY07 1137 aa10.97□□□□□ -0.65
APOBEC1-202ENST00000467171 TMOD2Q9NZR1 351 aa10.97□□□□□ -0.65
APOBEC1-202ENST00000467171 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
APOBEC1-202ENST00000467171 VPS9D1Q9Y2B5 631 aa10.97□□□□□ -0.65
APOBEC1-202ENST00000467171 PCDHAC2Q9Y5I4 1007 aa10.97□□□□□ -0.65
APOBEC1-202ENST00000467171 DDTLA6NHG4 134 aaPredicted RBP10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 KLRF2D3W0D1 207 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 hCG_1984214I3L0E3 225 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 NFKBIEO00221 500 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 NR1I2O75469 434 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 BMP15O95972 392 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 PDHBP11177 359 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 PTPREP23469 700 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 RPS12P25398 132 aaKnown RBP10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 TRAPPC10P48553 1259 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 TOB1P50616 345 aaPredicted RBP10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 SNW1Q13573 536 aaKnown RBP10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 DLGAP5Q15398 846 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 MAP3K11Q16584 847 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 SLC35G1Q2M3R5 365 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 ASPRV1Q53RT3 343 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 CIAPIN1Q6FI81 312 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 ZNF713Q8N859 430 aaPredicted RBP10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 DAGLBQ8NCG7 672 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 FAM151AQ8WW52 585 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 JDP2Q8WYK2 163 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 RBSNQ9H1K0 784 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 TDRD3Q9H7E2 651 aaKnown RBP10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 DNAJC18Q9H819 358 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 NYAP2Q9P242 653 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 SYNPO2Q9UMS6 1093 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.65
APOBEC1-202ENST00000467171 CYTH3O43739 400 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 CUTAO60888 179 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 CACNB3P54284 484 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 ZNF280AP59817 542 aaPredicted RBP10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 CXCL9Q07325 125 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 NR5A1Q13285 461 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 TNIP1Q15025 636 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 UVSSAQ2YD98 709 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 FAM83AQ86UY5 434 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 FMR1NBQ8N0W7 255 aaPredicted RBP10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 FSIP1Q8NA03 581 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 TNMDQ9H2S6 317 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 GOLPH3LQ9H4A5 285 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 RIOX1Q9H6W3 641 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 BARHL2Q9NY43 387 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 ZNF70Q9UC06 446 aaPredicted RBP10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 NOL7Q9UMY1 257 aaKnown RBP10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 COL4A5P29400 1685 aa10.95□□□□□ -0.66
APOBEC1-202ENST00000467171 SCN9AQ15858 1988 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 TRIM75PA6NK02 468 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 CCDC192P0DO97 292 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 NLRP5P59047 1200 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 TCP10Q12799 353 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 CERKLQ49MI3 558 aaPredicted RBP10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 TMEM179Q6ZVK1 233 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 CCDC12Q8WUD4 166 aaPredicted RBP10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 ZDHHC16Q969W1 377 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 TIGD1Q96MW7 591 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 TRIM34Q9BYJ4 488 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 CABP5Q9NP86 173 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 PCDHA4Q9UN74 947 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 HPSEQ9Y251 543 aa10.94□□□□□ -0.66
APOBEC1-202ENST00000467171 ZNF646O15015 1829 aaPredicted RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 ESYT2A0FGR8 921 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 USP17L5A8MUK1 530 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 M0R2N6 131 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 STXBP3O00186 592 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 KINO60870 393 aaKnown RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 CAVIN2O95810 425 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 GPATCH4Q5T3I0 446 aaKnown RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 RESP18Q5W5W9 173 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 ZSCAN29Q8IWY8 852 aaPredicted RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 ELOA2Q8IYF1 753 aaPredicted RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 BLIDQ8IZY5 108 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 KRI1Q8N9T8 703 aaKnown RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 ANP32BQ92688 251 aaKnown RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 DPF2Q92785 391 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 KCTD12Q96CX2 325 aaKnown RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 RRP36Q96EU6 259 aaKnown RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 ZMYND12Q9H0C1 365 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 EMILIN3Q9NT22 766 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 PLA2G2EQ9NZK7 142 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 CLIP2Q9UDT6 1046 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 SRPRBQ9Y5M8 271 aaKnown RBP10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 FOCADQ5VW36 1801 aa10.93□□□□□ -0.66
APOBEC1-202ENST00000467171 MPHOSPH10O00566 681 aaKnown RBP10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 MYO1BO43795 1136 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 GOLGA8HP0CJ92 632 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms