RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 VWA3AA6NCI4 1184 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 CACNB3P54284 484 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 ZNF543Q08ER8 600 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 HOMER1Q86YM7 354 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 DRC7Q8IY82 874 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 PDILTQ8N807 584 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 TRIML1Q8N9V2 468 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 EPSTI1Q96J88 318 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 TRIM34Q9BYJ4 488 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 DNAJC18Q9H819 358 aa23.33■■□□□ 1.33
CCDC78-207ENST00000466708 ATRNL1Q5VV63 1379 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 SMCO2A6NFE2 343 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 DDTLA6NHG4 134 aaPredicted RBP23.33■■□□□ 1.32
CCDC78-207ENST00000466708 SLFN14P0C7P3 912 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 LONP1P36776 959 aaKnown RBP23.33■■□□□ 1.32
CCDC78-207ENST00000466708 SARSP49591 514 aaKnown RBP23.33■■□□□ 1.32
CCDC78-207ENST00000466708 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.32
CCDC78-207ENST00000466708 CFAP100Q494V2 611 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 ZSCAN29Q8IWY8 852 aaPredicted RBP23.33■■□□□ 1.32
CCDC78-207ENST00000466708 C4orf32Q8N8J7 132 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 RASGRP4Q8TDF6 673 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 FBXO41Q8TF61 875 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 UBA5Q9GZZ9 404 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 VAT1LQ9HCJ6 419 aa23.33■■□□□ 1.32
CCDC78-207ENST00000466708 MYH4Q9Y623 1939 aa23.32■■□□□ 1.32
CCDC78-207ENST00000466708 LAD1O00515 517 aa23.32■■□□□ 1.32
CCDC78-207ENST00000466708 KCNA3P22001 575 aa23.32■■□□□ 1.32
CCDC78-207ENST00000466708 CERKLQ49MI3 558 aaPredicted RBP23.32■■□□□ 1.32
CCDC78-207ENST00000466708 TATDN1Q6P1N9 297 aa23.32■■□□□ 1.32
CCDC78-207ENST00000466708 SMARCE1Q969G3 411 aa23.32■■□□□ 1.32
CCDC78-207ENST00000466708 MKL1Q969V6 931 aa23.32■■□□□ 1.32
CCDC78-207ENST00000466708 FRMPD2Q68DX3 1309 aaPredicted RBP23.31■■□□□ 1.32
CCDC78-207ENST00000466708 DPEP1P16444 411 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 RSBN1LQ6PCB5 846 aaPredicted RBP23.31■■□□□ 1.32
CCDC78-207ENST00000466708 SH3BP5LQ7L8J4 393 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 SPATA20Q8TB22 786 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 TTC12Q9H892 705 aaPredicted RBP23.31■■□□□ 1.32
CCDC78-207ENST00000466708 KANSL2Q9H9L4 492 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 NYAP2Q9P242 653 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 KIF13BQ9NQT8 1826 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 FOXN1O15353 648 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 SMC2O95347 1197 aa23.31■■□□□ 1.32
CCDC78-207ENST00000466708 TDRD3Q9H7E2 651 aaKnown RBP23.31■■□□□ 1.32
CCDC78-207ENST00000466708 VIL1P09327 827 aaKnown RBP23.3■■□□□ 1.32
CCDC78-207ENST00000466708 NCAPHQ15003 741 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 NONOQ15233 471 aaKnown RBP eCLIP23.3■■□□□ 1.32
CCDC78-207ENST00000466708 INF2Q27J81 1249 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 ISM2Q6H9L7 571 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 SH3RF1Q7Z6J0 888 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 CLEC10AQ8IUN9 316 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 LARGE2Q8N3Y3 721 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 DHX58Q96C10 678 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 DACH1Q9UI36 760 aa23.3■■□□□ 1.32
CCDC78-207ENST00000466708 MYO1BO43795 1136 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 PRPHP41219 470 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 ORC2Q13416 577 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-207ENST00000466708 PPP1R18Q6NYC8 613 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 IQUBQ8NA54 791 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 MLKLQ8NB16 471 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 GPCPD1Q9NPB8 672 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 MAN1B1Q9UKM7 699 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 HDAC9Q9UKV0 1011 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 A0A087X0B3 334 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 PNMA6FA0A0J9YX94 578 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 MYL5Q02045 173 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 TMEM179Q6ZVK1 233 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 PRMT6Q96LA8 375 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-207ENST00000466708 ZNF830Q96NB3 372 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-207ENST00000466708 TMOD2Q9NZR1 351 aa23.29■■□□□ 1.32
CCDC78-207ENST00000466708 TXLNAP40222 546 aa23.28■■□□□ 1.32
CCDC78-207ENST00000466708 ATP2B2Q01814 1243 aa23.28■■□□□ 1.32
CCDC78-207ENST00000466708 MORC3Q14149 939 aa23.28■■□□□ 1.32
CCDC78-207ENST00000466708 IL17AQ16552 155 aa23.28■■□□□ 1.32
CCDC78-207ENST00000466708 DTHD1Q6ZMT9 781 aa23.28■■□□□ 1.32
CCDC78-207ENST00000466708 REXO1Q8N1G1 1221 aaKnown RBP23.28■■□□□ 1.32
CCDC78-207ENST00000466708 JMJD4Q9H9V9 463 aa23.28■■□□□ 1.32
CCDC78-207ENST00000466708 PRR29P0C7W0 189 aa23.27■■□□□ 1.32
CCDC78-207ENST00000466708 CT47A1Q5JQC4 288 aaPredicted RBP23.27■■□□□ 1.32
CCDC78-207ENST00000466708 ADGRF4Q8IZF3 695 aa23.27■■□□□ 1.32
CCDC78-207ENST00000466708 DCAF4Q8WV16 495 aa23.27■■□□□ 1.32
CCDC78-207ENST00000466708 GMLQ99445 158 aa23.27■■□□□ 1.32
CCDC78-207ENST00000466708 TGFB2P61812 414 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 CCDC96Q2M329 555 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 CCDC186Q7Z3E2 898 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 PAGE5Q96GU1 130 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 SPDYE2BA6NHP3 402 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 PSMD14O00487 310 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 SPDYE6P0CI01 402 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 EEF2P13639 858 aaKnown RBP23.26■■□□□ 1.31
CCDC78-207ENST00000466708 BMP6P22004 513 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 E2F4Q16254 413 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 NEK8Q86SG6 692 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 OGFOD1Q8N543 542 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 MTMR8Q96EF0 704 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 GSDMAQ96QA5 445 aa23.26■■□□□ 1.31
CCDC78-207ENST00000466708 OFD1O75665 1012 aa23.25■■□□□ 1.31
CCDC78-207ENST00000466708 PTGS1P23219 599 aa23.25■■□□□ 1.31
CCDC78-207ENST00000466708 ADCY7P51828 1080 aa23.25■■□□□ 1.31
CCDC78-207ENST00000466708 ABCB5Q2M3G0 1257 aa23.25■■□□□ 1.31
CCDC78-207ENST00000466708 GRAMD1CQ8IYS0 662 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms