RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 SPC25Q9HBM1 224 aa17.96■□□□□ 0.47
HMGXB4-206ENST00000466438 EPOPA6NHQ4 379 aa17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 USP5P45974 858 aa17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 RPUSD2Q8IZ73 545 aaKnown RBP17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 FBXL18Q96ME1 805 aa17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 CERS4Q9HA82 394 aa17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 WDFY4Q6ZS81 3184 aa17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 UMODL1Q5DID0 1318 aa17.95■□□□□ 0.46
HMGXB4-206ENST00000466438 PARP14Q460N5 1801 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 ZBBXA8MT70 800 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 CSPP1Q1MSJ5 1256 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 KIAA1755Q5JYT7 1200 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 CERS3Q8IU89 383 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 RIOX2Q8IUF8 465 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 UPF3AQ9H1J1 476 aaKnown RBP17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 SNRKQ9NRH2 765 aa17.94■□□□□ 0.46
HMGXB4-206ENST00000466438 SNAI1O95863 264 aaPredicted RBP17.93■□□□□ 0.46
HMGXB4-206ENST00000466438 ALADP13716 330 aa17.93■□□□□ 0.46
HMGXB4-206ENST00000466438 CCL23P55773 120 aa17.93■□□□□ 0.46
HMGXB4-206ENST00000466438 GJA9P57773 515 aa17.93■□□□□ 0.46
HMGXB4-206ENST00000466438 GNASQ5JWF2 1037 aa17.93■□□□□ 0.46
HMGXB4-206ENST00000466438 GJD3Q8N144 294 aa17.93■□□□□ 0.46
HMGXB4-206ENST00000466438 CYP2E1P05181 493 aaPredicted RBP17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 COPB2P35606 906 aa17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 MAMDC4Q6UXC1 1216 aa17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 SLC43A3Q8NBI5 491 aa17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 ARNTL2Q8WYA1 636 aa17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 NOC4LQ9BVI4 516 aaKnown RBP17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 WNT8AQ9H1J5 351 aa17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 ADAMTS5Q9UNA0 930 aa17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 COL11A1P12107 1806 aaPredicted RBP17.92■□□□□ 0.46
HMGXB4-206ENST00000466438 MPHOSPH10O00566 681 aaKnown RBP17.91■□□□□ 0.46
HMGXB4-206ENST00000466438 SRGAP3O43295 1099 aa17.91■□□□□ 0.46
HMGXB4-206ENST00000466438 ADCY6O43306 1168 aa17.91■□□□□ 0.46
HMGXB4-206ENST00000466438 CYP7A1P22680 504 aa17.91■□□□□ 0.46
HMGXB4-206ENST00000466438 PLCD1P51178 756 aa17.91■□□□□ 0.46
HMGXB4-206ENST00000466438 FAM178BQ8IXR5 827 aa17.91■□□□□ 0.46
HMGXB4-206ENST00000466438 WDR46O15213 610 aaKnown RBP17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 PFKMP08237 780 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 STAT3P40763 770 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 TAP1Q03518 808 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 GABPAQ06546 454 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 GRB10Q13322 594 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 SPICE1Q8N0Z3 855 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 MIGA1Q8NAN2 632 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 VWCEQ96DN2 955 aa17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 MYO5AQ9Y4I1 1855 aaKnown RBP17.9■□□□□ 0.46
HMGXB4-206ENST00000466438 BRWD1Q9NSI6 2320 aa17.89■□□□□ 0.46
HMGXB4-206ENST00000466438 NKX3-2P78367 333 aa17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 MTX1Q13505 466 aa17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 TTC39AQ5SRH9 613 aa17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 SH2D4AQ9H788 454 aa17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 ZNF214Q9UL59 606 aaPredicted RBP17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 ZBED9Q6R2W3 1325 aa17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 CACNA1AO00555 2505 aa17.89■□□□□ 0.45
HMGXB4-206ENST00000466438 COL4A4P53420 1690 aaPredicted RBP17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 CTAGE5O15320 804 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 CABYRO75952 493 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 SSTR3P32745 418 aaPredicted RBP17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 TTLL4Q14679 1199 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 CCDC144BQ3MJ40 725 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 TMEM179Q6ZVK1 233 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 ZNF467Q7Z7K2 595 aaPredicted RBP17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 SLC9A7Q96T83 725 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 MEIS3Q99687 375 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 SEZ6LQ9BYH1 1024 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 ARHGEF10LQ9HCE6 1279 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 PIH1D3Q9NQM4 214 aaKnown RBP17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 TMX2Q9Y320 296 aa17.88■□□□□ 0.45
HMGXB4-206ENST00000466438 DNAJC25-GNG10A0A024R161 153 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 VWA5AO00534 786 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 LPXNO60711 386 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 ARHGEF15O94989 841 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 ITGA7Q13683 1181 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 SCLYQ96I15 445 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 ABHD16BQ9H3Z7 469 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 UBE2ZQ9H832 354 aaPredicted RBP17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 LMCD1Q9NZU5 365 aa17.87■□□□□ 0.45
HMGXB4-206ENST00000466438 B4GALT4O60513 344 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 ZAP70P43403 619 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 LEXMQ3ZCV2 418 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 CXCL17Q6UXB2 119 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 REPS2Q8NFH8 660 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 PHOSPHO2Q8TCD6 241 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 DDX11Q96FC9 970 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 TRPV6Q9H1D0 765 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 FBXO28Q9NVF7 368 aa17.86■□□□□ 0.45
HMGXB4-206ENST00000466438 DCXO43602 365 aa17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 ST18O60284 1047 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms