RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 UBAC1Q9BSL1 405 aa22.12■■□□□ 1.13
SDF4-205ENST00000465727 TOMM22Q9NS69 142 aa22.12■■□□□ 1.13
SDF4-205ENST00000465727 PNPLA7Q6ZV29 1317 aa22.12■■□□□ 1.13
SDF4-205ENST00000465727 TNS3Q68CZ2 1445 aa22.12■■□□□ 1.13
SDF4-205ENST00000465727 BCORQ6W2J9 1755 aa22.12■■□□□ 1.13
SDF4-205ENST00000465727 ANKRD18BA2A2Z9 1011 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 FAM205CA6NFA0 338 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 PRPF3O43395 683 aaKnown RBP22.11■■□□□ 1.13
SDF4-205ENST00000465727 EPB41P11171 864 aaKnown RBP22.11■■□□□ 1.13
SDF4-205ENST00000465727 ITGA6P23229 1130 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 SEMA3FQ13275 785 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 ZNF507Q8TCN5 953 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 ZKSCAN3Q9BRR0 538 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 NUP58Q9BVL2 599 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 TSGA10Q9BZW7 698 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 UBAP1LF5GYI3 381 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 RPN1P04843 607 aaKnown RBP22.11■■□□□ 1.13
SDF4-205ENST00000465727 MYBL2P10244 700 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 PHKA1P46020 1223 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 TDO2P48775 406 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 PKN1Q16512 942 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 BCAS4Q8TDM0 211 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 BLZF1Q9H2G9 400 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 THAP9Q9H5L6 903 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 GNL3LQ9NVN8 582 aaKnown RBP22.11■■□□□ 1.13
SDF4-205ENST00000465727 ZNHIT6Q9NWK9 470 aaKnown RBP22.11■■□□□ 1.13
SDF4-205ENST00000465727 VPS54Q9P1Q0 977 aa22.11■■□□□ 1.13
SDF4-205ENST00000465727 XIRP1Q702N8 1843 aaKnown RBP22.1■■□□□ 1.13
SDF4-205ENST00000465727 TRAPPC10P48553 1259 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 DNM2P50570 870 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 EARS2Q5JPH6 523 aaKnown RBP22.1■■□□□ 1.13
SDF4-205ENST00000465727 SPATS2Q86XZ4 545 aaKnown RBP22.1■■□□□ 1.13
SDF4-205ENST00000465727 TNFRSF25Q93038 417 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 SHISA4Q96DD7 197 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 PTGDRQ13258 359 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 MAGEB6Q8N7X4 407 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 ARMT1Q9H993 441 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 GRIN2DO15399 1336 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 TNS2Q63HR2 1409 aa22.1■■□□□ 1.13
SDF4-205ENST00000465727 IDEP14735 1019 aa22.09■■□□□ 1.13
SDF4-205ENST00000465727 PRLRP16471 622 aa22.09■■□□□ 1.13
SDF4-205ENST00000465727 SKOR1P84550 965 aa22.09■■□□□ 1.13
SDF4-205ENST00000465727 IRF2BP1Q8IU81 584 aa22.09■■□□□ 1.13
SDF4-205ENST00000465727 NOC3LQ8WTT2 800 aaKnown RBP22.09■■□□□ 1.13
SDF4-205ENST00000465727 STAMQ92783 540 aa22.09■■□□□ 1.13
SDF4-205ENST00000465727 RBM28Q9NW13 759 aaKnown RBP22.09■■□□□ 1.13
SDF4-205ENST00000465727 SOS2Q07890 1332 aaPredicted RBP22.08■■□□□ 1.13
SDF4-205ENST00000465727 COBLO75128 1261 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 ZMYND10O75800 440 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 PRCPP42785 496 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 CDK17Q00537 523 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 ZNF174Q15697 407 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 ALS2CLQ60I27 953 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 KIF6Q6ZMV9 814 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 ADSSL1Q8N142 457 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 SPATA5Q8NB90 893 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 LPIN2Q92539 896 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 GDAP1L1Q96MZ0 367 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 MTRQ99707 1265 aa22.08■■□□□ 1.13
SDF4-205ENST00000465727 LIG3P49916 1009 aa22.08■■□□□ 1.12
SDF4-205ENST00000465727 PUM3Q15397 648 aaKnown RBP22.08■■□□□ 1.12
SDF4-205ENST00000465727 SEC23AQ15436 765 aa22.08■■□□□ 1.12
SDF4-205ENST00000465727 EMBQ6PCB8 327 aa22.08■■□□□ 1.12
SDF4-205ENST00000465727 B4GALNT4Q76KP1 1039 aa22.08■■□□□ 1.12
SDF4-205ENST00000465727 GSPT2Q8IYD1 628 aaKnown RBP22.08■■□□□ 1.12
SDF4-205ENST00000465727 TRIM58Q8NG06 486 aa22.08■■□□□ 1.12
SDF4-205ENST00000465727 GREM2Q9H772 168 aa22.08■■□□□ 1.12
SDF4-205ENST00000465727 JADE2Q9NQC1 790 aa22.08■■□□□ 1.12
SDF4-205ENST00000465727 PDE2AO00408 941 aaPredicted RBP22.07■■□□□ 1.12
SDF4-205ENST00000465727 EPHB4P54760 987 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 CTSWP56202 376 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 GNGT1P63211 74 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 FUT2Q10981 343 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 SECISBP2LQ93073 1101 aaKnown RBP22.07■■□□□ 1.12
SDF4-205ENST00000465727 MAGEC2Q9UBF1 373 aaPredicted RBP22.07■■□□□ 1.12
SDF4-205ENST00000465727 SNX12Q9UMY4 172 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 TNKSO95271 1327 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 SRGNP10124 158 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 INPP5BP32019 993 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 KIF5AQ12840 1032 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 ARL6IP4Q66PJ3 421 aaKnown RBP22.07■■□□□ 1.12
SDF4-205ENST00000465727 SND1Q7KZF4 910 aaKnown RBP eCLIP22.07■■□□□ 1.129e-8■□□□□ 11.1
SDF4-205ENST00000465727 ESR2Q92731 530 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 KAT2BQ92831 832 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 IQCDQ96DY2 449 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 TTYH3Q9C0H2 523 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 NHEJ1Q9H9Q4 299 aaPredicted RBP22.07■■□□□ 1.12
SDF4-205ENST00000465727 SLC4A4Q9Y6R1 1079 aa22.07■■□□□ 1.12
SDF4-205ENST00000465727 C1orf167Q5SNV9 1468 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 PLCH1Q4KWH8 1693 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 CLSTN1O94985 981 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 MYL1P05976 194 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 TNFRSF8P28908 595 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 VAV2P52735 878 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 GSCP56915 257 aaPredicted RBP22.06■■□□□ 1.12
SDF4-205ENST00000465727 ZBED6P86452 979 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 C2orf54Q08AI8 447 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 KCNB1Q14721 858 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms