RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 SLC4A3P48751 1232 aa24.83■■□□□ 1.57
CSPG5-204ENST00000465441 LRRC47Q8N1G4 583 aaKnown RBP24.83■■□□□ 1.57
CSPG5-204ENST00000465441 KIFC2Q96AC6 838 aa24.83■■□□□ 1.57
CSPG5-204ENST00000465441 ATP2A1O14983 1001 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 SLC3A2P08195 630 aaKnown RBP24.82■■□□□ 1.56
CSPG5-204ENST00000465441 ZNF865P0CJ78 1059 aaPredicted RBP24.82■■□□□ 1.56
CSPG5-204ENST00000465441 ADCYAP1R1P41586 468 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 SLFN13Q68D06 897 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 CCDC129Q6ZRS4 1044 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 GMCL1P1Q8NEA9 526 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 DDX11Q96FC9 970 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 ZBTB47Q9UFB7 747 aaPredicted RBP24.82■■□□□ 1.56
CSPG5-204ENST00000465441 FEM1BQ9UK73 627 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 SYNPO2Q9UMS6 1093 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 ATP11BQ9Y2G3 1177 aa24.82■■□□□ 1.56
CSPG5-204ENST00000465441 CTDP1Q9Y5B0 961 aaPredicted RBP24.82■■□□□ 1.56
CSPG5-204ENST00000465441 FERMT2Q96AC1 680 aa24.81■■□□□ 1.56
CSPG5-204ENST00000465441 SLC38A10Q9HBR0 1119 aa24.81■■□□□ 1.56
CSPG5-204ENST00000465441 RAVER2Q9HCJ3 691 aaKnown RBP24.81■■□□□ 1.56
CSPG5-204ENST00000465441 INCENPQ9NQS7 918 aa24.81■■□□□ 1.56
CSPG5-204ENST00000465441 FOXP2O15409 715 aa24.8■■□□□ 1.56
CSPG5-204ENST00000465441 RARBP10826 455 aa24.8■■□□□ 1.56
CSPG5-204ENST00000465441 BMP3P12645 472 aa24.8■■□□□ 1.56
CSPG5-204ENST00000465441 GPR153Q6NV75 609 aa24.8■■□□□ 1.56
CSPG5-204ENST00000465441 LBHD1Q9BQE6 289 aaPredicted RBP24.8■■□□□ 1.56
CSPG5-204ENST00000465441 XPNPEP3Q9NQH7 507 aa24.8■■□□□ 1.56
CSPG5-204ENST00000465441 PRKAG2Q9UGJ0 569 aa24.8■■□□□ 1.56
CSPG5-204ENST00000465441 MYH4Q9Y623 1939 aa24.8■■□□□ 1.56
CSPG5-204ENST00000465441 DNAJC25-GNG10A0A024R161 153 aa24.79■■□□□ 1.56
CSPG5-204ENST00000465441 CTDSPL2Q05D32 466 aa24.79■■□□□ 1.56
CSPG5-204ENST00000465441 EVI5LQ96CN4 794 aa24.79■■□□□ 1.56
CSPG5-204ENST00000465441 PLIN4Q96Q06 1357 aa24.79■■□□□ 1.56
CSPG5-204ENST00000465441 SNAI1O95863 264 aaPredicted RBP24.78■■□□□ 1.56
CSPG5-204ENST00000465441 PGK1P00558 417 aa24.78■■□□□ 1.56
CSPG5-204ENST00000465441 PDE1AP54750 535 aa24.78■■□□□ 1.56
CSPG5-204ENST00000465441 HDAC1Q13547 482 aaPredicted RBP24.78■■□□□ 1.56
CSPG5-204ENST00000465441 SNX17Q15036 470 aa24.78■■□□□ 1.56
CSPG5-204ENST00000465441 MSL3Q8N5Y2 521 aaKnown RBP24.78■■□□□ 1.56
CSPG5-204ENST00000465441 CNPY2Q9Y2B0 182 aa24.78■■□□□ 1.56
CSPG5-204ENST00000465441 PLXNA1Q9UIW2 1896 aa24.78■■□□□ 1.56
CSPG5-204ENST00000465441 TMEM232C9JQI7 657 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 AKR1A1P14550 325 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 TRIM60Q495X7 471 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 VPS53Q5VIR6 699 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 MAMDC4Q6UXC1 1216 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 RNF180Q86T96 592 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 CHMP4CQ96CF2 233 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 PHF24Q9UPV7 400 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.77■■□□□ 1.56
CSPG5-204ENST00000465441 TACC3Q9Y6A5 838 aa24.77■■□□□ 1.56
CSPG5-204ENST00000465441 C1orf53Q5VUE5 145 aa24.76■■□□□ 1.55
CSPG5-204ENST00000465441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.76■■□□□ 1.55
CSPG5-204ENST00000465441 ANKRD35Q8N283 1001 aa24.76■■□□□ 1.55
CSPG5-204ENST00000465441 CHST13Q8NET6 341 aa24.76■■□□□ 1.55
CSPG5-204ENST00000465441 IL17RBQ9NRM6 502 aa24.76■■□□□ 1.55
CSPG5-204ENST00000465441 LAMA3Q16787 3333 aa24.76■■□□□ 1.55
CSPG5-204ENST00000465441 FDX1P10109 184 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 MCCP23508 829 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 OAZ1P54368 228 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 Q7L0L9 218 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 DEFB123Q8N688 67 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 CHURC1Q8WUH1 139 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 STAG1Q8WVM7 1258 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 LENG1Q96BZ8 264 aaPredicted RBP24.75■■□□□ 1.55
CSPG5-204ENST00000465441 PRDM5Q9NQX1 630 aaPredicted RBP24.75■■□□□ 1.55
CSPG5-204ENST00000465441 HELLSQ9NRZ9 838 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 FAM184BQ9ULE4 1060 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 SYNGAP1Q96PV0 1343 aa24.75■■□□□ 1.55
CSPG5-204ENST00000465441 TSPY2A6NKD2 308 aa24.74■■□□□ 1.55
CSPG5-204ENST00000465441 SH3RF1Q7Z6J0 888 aa24.74■■□□□ 1.55
CSPG5-204ENST00000465441 ZNF467Q7Z7K2 595 aaPredicted RBP24.74■■□□□ 1.55
CSPG5-204ENST00000465441 GMCL1Q96IK5 515 aa24.74■■□□□ 1.55
CSPG5-204ENST00000465441 FBXO40Q9UH90 709 aa24.74■■□□□ 1.55
CSPG5-204ENST00000465441 ANAPC4Q9UJX5 808 aa24.74■■□□□ 1.55
CSPG5-204ENST00000465441 ISY1Q9ULR0 285 aaKnown RBP24.74■■□□□ 1.55
CSPG5-204ENST00000465441 STX8Q9UNK0 236 aa24.74■■□□□ 1.55
CSPG5-204ENST00000465441 DNAH12Q6ZR08 3092 aa24.74■■□□□ 1.55
CSPG5-204ENST00000465441 NMT2O60551 498 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 ADAMTS4O75173 837 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 SLC1A4P43007 532 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 STAT2P52630 851 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 TLE2Q04725 743 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 ALX1Q15699 326 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 PPP4R3BQ5MIZ7 849 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 FAM160B2Q86V87 743 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 FGD4Q96M96 766 aa24.73■■□□□ 1.55
CSPG5-204ENST00000465441 ZHX1Q9UKY1 873 aaPredicted RBP24.73■■□□□ 1.55
CSPG5-204ENST00000465441 TRIM43BA6NCK2 446 aa24.72■■□□□ 1.55
CSPG5-204ENST00000465441 RANBP6O60518 1105 aaKnown RBP24.72■■□□□ 1.55
CSPG5-204ENST00000465441 ACVR2BQ13705 512 aa24.72■■□□□ 1.55
CSPG5-204ENST00000465441 RCSD1Q6JBY9 416 aa24.72■■□□□ 1.55
CSPG5-204ENST00000465441 BADQ92934 168 aa24.72■■□□□ 1.55
CSPG5-204ENST00000465441 TRIM43Q96BQ3 446 aaPredicted RBP24.72■■□□□ 1.55
CSPG5-204ENST00000465441 FAM227BQ96M60 508 aa24.72■■□□□ 1.55
CSPG5-204ENST00000465441 AGBL1Q96MI9 1066 aa24.72■■□□□ 1.55
CSPG5-204ENST00000465441 PDLIM7Q9NR12 457 aa24.72■■□□□ 1.55
CSPG5-204ENST00000465441 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.72■■□□□ 1.55
CSPG5-204ENST00000465441 ZNF536O15090 1300 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 PLA2G6O60733 806 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 FGAP02671 866 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms