RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 KCTD2Q14681 263 aa30.66■■■□□ 2.5
U2AF1-206ENST00000464750 PPP4R3BQ5MIZ7 849 aa30.66■■■□□ 2.5
U2AF1-206ENST00000464750 SNRNP48Q6IEG0 339 aaKnown RBP30.66■■■□□ 2.5
U2AF1-206ENST00000464750 FEM1BQ9UK73 627 aa30.66■■■□□ 2.5
U2AF1-206ENST00000464750 PFASO15067 1338 aa30.66■■■□□ 2.5
U2AF1-206ENST00000464750 ZMYM6O95789 1325 aa30.66■■■□□ 2.5
U2AF1-206ENST00000464750 RANBP6O60518 1105 aaKnown RBP30.65■■■□□ 2.5
U2AF1-206ENST00000464750 FGAP02671 866 aa30.65■■■□□ 2.5
U2AF1-206ENST00000464750 BMP3P12645 472 aa30.65■■■□□ 2.5
U2AF1-206ENST00000464750 SDSP20132 328 aa30.65■■■□□ 2.5
U2AF1-206ENST00000464750 ISY1Q9ULR0 285 aaKnown RBP30.65■■■□□ 2.5
U2AF1-206ENST00000464750 STX8Q9UNK0 236 aa30.65■■■□□ 2.5
U2AF1-206ENST00000464750 CTDP1Q9Y5B0 961 aaPredicted RBP30.65■■■□□ 2.5
U2AF1-206ENST00000464750 ORC4O43929 436 aa30.64■■■□□ 2.5
U2AF1-206ENST00000464750 ZBED4O75132 1171 aa30.64■■■□□ 2.5
U2AF1-206ENST00000464750 PGK2P07205 417 aa30.64■■■□□ 2.5
U2AF1-206ENST00000464750 C7orf61Q8IZ16 206 aa30.64■■■□□ 2.5
U2AF1-206ENST00000464750 LAMA4Q16363 1823 aa30.63■■■□□ 2.49
U2AF1-206ENST00000464750 NMT2O60551 498 aa30.63■■■□□ 2.49
U2AF1-206ENST00000464750 COL6A1P12109 1028 aa30.63■■■□□ 2.49
U2AF1-206ENST00000464750 CPXCR1Q8N123 301 aa30.63■■■□□ 2.49
U2AF1-206ENST00000464750 SLC38A10Q9HBR0 1119 aa30.63■■■□□ 2.49
U2AF1-206ENST00000464750 IL17RBQ9NRM6 502 aa30.63■■■□□ 2.49
U2AF1-206ENST00000464750 TOMM22Q9NS69 142 aa30.63■■■□□ 2.49
U2AF1-206ENST00000464750 ATP2A1O14983 1001 aa30.62■■■□□ 2.49
U2AF1-206ENST00000464750 GMCL1Q96IK5 515 aa30.62■■■□□ 2.49
U2AF1-206ENST00000464750 RIPK3Q9Y572 518 aa30.62■■■□□ 2.49
U2AF1-206ENST00000464750 FGRP09769 529 aa30.61■■■□□ 2.49
U2AF1-206ENST00000464750 SLC4A3P48751 1232 aa30.61■■■□□ 2.49
U2AF1-206ENST00000464750 MFAP1P55081 439 aaKnown RBP30.61■■■□□ 2.49
U2AF1-206ENST00000464750 ZNF792Q3KQV3 632 aa30.61■■■□□ 2.49
U2AF1-206ENST00000464750 CHMP4CQ96CF2 233 aa30.61■■■□□ 2.49
U2AF1-206ENST00000464750 RAVER2Q9HCJ3 691 aaKnown RBP30.61■■■□□ 2.49
U2AF1-206ENST00000464750 TMEM232C9JQI7 657 aa30.6■■■□□ 2.49
U2AF1-206ENST00000464750 SLC1A4P43007 532 aa30.6■■■□□ 2.49
U2AF1-206ENST00000464750 STAT2P52630 851 aa30.6■■■□□ 2.49
U2AF1-206ENST00000464750 HAND2P61296 217 aa30.6■■■□□ 2.49
U2AF1-206ENST00000464750 IRX6P78412 446 aaPredicted RBP30.6■■■□□ 2.49
U2AF1-206ENST00000464750 RRP12Q5JTH9 1297 aaKnown RBP30.6■■■□□ 2.49
U2AF1-206ENST00000464750 PRAMEF19Q5SWL8 479 aa30.6■■■□□ 2.49
U2AF1-206ENST00000464750 DIAPH3Q9NSV4 1193 aa30.6■■■□□ 2.49
U2AF1-206ENST00000464750 DIS3Q9Y2L1 958 aaKnown RBP30.6■■■□□ 2.49
U2AF1-206ENST00000464750 SEPT4O43236 478 aa30.59■■■□□ 2.49
U2AF1-206ENST00000464750 MCCP23508 829 aa30.59■■■□□ 2.49
U2AF1-206ENST00000464750 RBM27Q9P2N5 1060 aaKnown RBP30.59■■■□□ 2.49
U2AF1-206ENST00000464750 IKQ13123 557 aaPredicted RBP30.58■■■□□ 2.49
U2AF1-206ENST00000464750 ANO1Q5XXA6 986 aa30.58■■■□□ 2.49
U2AF1-206ENST00000464750 CWC27Q6UX04 472 aaKnown RBP30.58■■■□□ 2.49
U2AF1-206ENST00000464750 FAM160B2Q86V87 743 aa30.58■■■□□ 2.49
U2AF1-206ENST00000464750 SMCHD1A6NHR9 2005 aa30.57■■■□□ 2.49
U2AF1-206ENST00000464750 NOVP48745 357 aa30.57■■■□□ 2.48
U2AF1-206ENST00000464750 FXR1P51114 621 aaKnown RBP eCLIP30.57■■■□□ 2.48
U2AF1-206ENST00000464750 OAZ1P54368 228 aa30.57■■■□□ 2.48
U2AF1-206ENST00000464750 RASGRP2Q7LDG7 609 aa30.57■■■□□ 2.48
U2AF1-206ENST00000464750 STAG1Q8WVM7 1258 aa30.57■■■□□ 2.48
U2AF1-206ENST00000464750 TINF2Q9BSI4 451 aa30.57■■■□□ 2.48
U2AF1-206ENST00000464750 ZMYND8Q9ULU4 1186 aaPredicted RBP30.57■■■□□ 2.48
U2AF1-206ENST00000464750 RANBP2P49792 3224 aaKnown RBP30.56■■■□□ 2.48
U2AF1-206ENST00000464750 HIP1O00291 1037 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 DNM1LO00429 736 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 FDX1P10109 184 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 KCTD1Q719H9 257 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 CHURC1Q8WUH1 139 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 DDX11Q96FC9 970 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 PRO3102Q9H379 93 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 NRBP1Q9UHY1 535 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 MTMR7Q9Y216 660 aa30.56■■■□□ 2.48
U2AF1-206ENST00000464750 TBC1D10CQ8IV04 446 aa30.55■■■□□ 2.48
U2AF1-206ENST00000464750 FBXO40Q9UH90 709 aa30.55■■■□□ 2.48
U2AF1-206ENST00000464750 MCM3APO60318 1980 aa30.54■■■□□ 2.48
U2AF1-206ENST00000464750 PDE4AP27815 886 aa30.54■■■□□ 2.48
U2AF1-206ENST00000464750 LRRC26Q2I0M4 334 aa30.54■■■□□ 2.48
U2AF1-206ENST00000464750 AKNAD1Q5T1N1 836 aa30.54■■■□□ 2.48
U2AF1-206ENST00000464750 RCSD1Q6JBY9 416 aa30.54■■■□□ 2.48
U2AF1-206ENST00000464750 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.54■■■□□ 2.48
U2AF1-206ENST00000464750 SENP6Q9GZR1 1112 aaPredicted RBP30.54■■■□□ 2.48
U2AF1-206ENST00000464750 DNAJC25-GNG10A0A024R161 153 aa30.53■■■□□ 2.48
U2AF1-206ENST00000464750 PLA2G6O60733 806 aa30.53■■■□□ 2.48
U2AF1-206ENST00000464750 PCP11498 1178 aaKnown RBP30.53■■■□□ 2.48
U2AF1-206ENST00000464750 CCDC96Q2M329 555 aa30.53■■■□□ 2.48
U2AF1-206ENST00000464750 GJC2Q5T442 439 aaPredicted RBP30.53■■■□□ 2.48
U2AF1-206ENST00000464750 MFSD6Q6ZSS7 791 aa30.53■■■□□ 2.48
U2AF1-206ENST00000464750 ARRDC4Q8NCT1 418 aa30.53■■■□□ 2.48
U2AF1-206ENST00000464750 CHST13Q8NET6 341 aa30.53■■■□□ 2.48
U2AF1-206ENST00000464750 TCP11L1Q9NUJ3 509 aa30.53■■■□□ 2.48
U2AF1-206ENST00000464750 SYN1P17600 705 aa30.52■■■□□ 2.48
U2AF1-206ENST00000464750 ANKRD35Q8N283 1001 aa30.52■■■□□ 2.48
U2AF1-206ENST00000464750 DCAF4Q8WV16 495 aa30.52■■■□□ 2.48
U2AF1-206ENST00000464750 RNF41Q9H4P4 317 aaPredicted RBP30.52■■■□□ 2.48
U2AF1-206ENST00000464750 HOMER2Q9NSB8 354 aa30.52■■■□□ 2.48
U2AF1-206ENST00000464750 KBTBD13C9JR72 458 aa30.51■■■□□ 2.47
U2AF1-206ENST00000464750 TOP1P11387 765 aaKnown RBP30.51■■■□□ 2.47
U2AF1-206ENST00000464750 TAL1P17542 331 aaPredicted RBP30.51■■■□□ 2.47
U2AF1-206ENST00000464750 TMEM47Q9BQJ4 181 aa30.51■■■□□ 2.47
U2AF1-206ENST00000464750 PRR12Q9ULL5 1215 aa30.51■■■□□ 2.47
U2AF1-206ENST00000464750 CNPY2Q9Y2B0 182 aa30.51■■■□□ 2.47
U2AF1-206ENST00000464750 ZNF536O15090 1300 aa30.5■■■□□ 2.47
U2AF1-206ENST00000464750 NEDD4P46934 1319 aa30.5■■■□□ 2.47
U2AF1-206ENST00000464750 MYCNP04198 464 aaPredicted RBP30.5■■■□□ 2.47
U2AF1-206ENST00000464750 MSL3Q8N5Y2 521 aaKnown RBP30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms