RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 DALRD3Q5D0E6 543 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 RILPL1Q5EBL4 403 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 C3orf20Q8ND61 904 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 GSDMAQ96QA5 445 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 METTL22Q9BUU2 404 aaPredicted RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 EPN3Q9H201 632 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 GJB4Q9NTQ9 266 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 FBXO2Q9UK22 296 aaPredicted RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 GUCA1BQ9UMX6 200 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 SRPRBQ9Y5M8 271 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 KRT86O43790 486 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 HSF2BPO75031 334 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 PRLRP16471 622 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 KCNA3P22001 575 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 CDR1P51861 262 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 EPHB4P54760 987 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 AMOTQ4VCS5 1084 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 CAVIN3Q969G5 261 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 NUP88Q99567 741 aaPredicted RBP12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 SLF1Q9BQI6 1058 aa12.9□□□□□ -0.34
TNRC6A-205ENST00000464539 SPEF2Q9C093 1822 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 MYO1FO00160 1098 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 SH2B2O14492 632 aaPredicted RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 METAP2P50579 478 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 NAP1L1P55209 391 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 NKX1-1Q15270 411 aaPredicted RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 SAFBQ15424 915 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 CCDC40Q4G0X9 1142 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 EPHA10Q5JZY3 1008 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 KDM7AQ6ZMT4 941 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 JAKMIP2Q96AA8 810 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 GPHNQ9NQX3 736 aaPredicted RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 N4BP3O15049 544 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 ABL1P00519 1130 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 ATP1A1P05023 1023 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 VEGFAP15692 232 aaPredicted RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 KRT9P35527 623 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 IARSP41252 1262 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 ANTXR2P58335 489 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 IRX1P78414 480 aaPredicted RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 SND1Q7KZF4 910 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 SH3RF1Q7Z6J0 888 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 OR8K1Q8NGG5 319 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 CAGE1Q8TC20 777 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 ANGEL1Q9UNK9 670 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 SAMM50Q9Y512 469 aa12.89□□□□□ -0.35
TNRC6A-205ENST00000464539 A0A1B0GUA9 196 aa12.88□□□□□ -0.35
TNRC6A-205ENST00000464539 ZNF213O14771 459 aa12.88□□□□□ -0.35
TNRC6A-205ENST00000464539 IFFO1Q0D2I5 559 aa12.88□□□□□ -0.35
TNRC6A-205ENST00000464539 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
TNRC6A-205ENST00000464539 CCDC122Q5T0U0 273 aa12.88□□□□□ -0.35
TNRC6A-205ENST00000464539 EP400NLQ6ZTU2 488 aa12.88□□□□□ -0.35
TNRC6A-205ENST00000464539 FOXP1Q9H334 677 aaPredicted RBP12.88□□□□□ -0.35
TNRC6A-205ENST00000464539 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 FGAP02671 866 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 GYS1P13807 737 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 COPB1P53618 953 aaKnown RBP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 GLE1Q53GS7 698 aaKnown RBP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 CD302Q8IX05 232 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 N4BP2L2Q92802 583 aaPredicted RBP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 TMEM87BQ96K49 555 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 AATFQ9NY61 560 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 REXO2Q9Y3B8 237 aaKnown RBP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 A0A1W2PQC6 194 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 M0R2C6 588 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 MYBL2P10244 700 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 EZRP15311 586 aaKnown RBP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 SLC8A1P32418 973 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 CYLC1P35663 651 aaPredicted RBP12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 PDIA6Q15084 440 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 KRT31Q15323 416 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 SNCBQ16143 134 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 C11orf91Q3C1V1 193 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 CCDC170Q8IYT3 715 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 EHD4Q9H223 541 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 RWDD2AQ9UIY3 292 aa12.87□□□□□ -0.35
TNRC6A-205ENST00000464539 SCP2P22307 547 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms