RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 DDX20Q9UHI6 824 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-206ENST00000464255 NR2E3Q9Y5X4 410 aa15.55■□□□□ 0.08
CTDSP1-206ENST00000464255 ZNFX1Q9P2E3 1918 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-206ENST00000464255 ORC4O43929 436 aa15.54■□□□□ 0.08
CTDSP1-206ENST00000464255 SLC3A2P08195 630 aaKnown RBP15.54■□□□□ 0.08
CTDSP1-206ENST00000464255 SDSP20132 328 aa15.54■□□□□ 0.08
CTDSP1-206ENST00000464255 FXR1P51114 621 aaKnown RBP eCLIP15.54■□□□□ 0.08
CTDSP1-206ENST00000464255 SLFN13Q68D06 897 aa15.54■□□□□ 0.08
CTDSP1-206ENST00000464255 SLC38A10Q9HBR0 1119 aa15.54■□□□□ 0.08
CTDSP1-206ENST00000464255 MYH4Q9Y623 1939 aa15.54■□□□□ 0.08
CTDSP1-206ENST00000464255 RILPL2Q969X0 211 aa15.53■□□□□ 0.08
CTDSP1-206ENST00000464255 GMCL1Q96IK5 515 aa15.53■□□□□ 0.08
CTDSP1-206ENST00000464255 MMP19Q99542 508 aa15.53■□□□□ 0.08
CTDSP1-206ENST00000464255 TEX13BQ9BXU2 312 aa15.53■□□□□ 0.08
CTDSP1-206ENST00000464255 FEM1BQ9UK73 627 aa15.53■□□□□ 0.08
CTDSP1-206ENST00000464255 DNAJC25-GNG10A0A024R161 153 aa15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 BMP3P12645 472 aa15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 PDE4AP27815 886 aa15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 CNGA1P29973 690 aa15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 SNRNP48Q6IEG0 339 aaKnown RBP15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 KIFC2Q96AC6 838 aa15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 DIS3Q9Y2L1 958 aaKnown RBP15.52■□□□□ 0.08
CTDSP1-206ENST00000464255 ZNF536O15090 1300 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 ZMYM6O95789 1325 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 CCDC171Q6TFL3 1326 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 SEPT4O43236 478 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 MCCP23508 829 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 LRRC26Q2I0M4 334 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 C7orf61Q8IZ16 206 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 CHMP4CQ96CF2 233 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 FGD4Q96M96 766 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 SLC5A4Q9NY91 659 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 SMCHD1A6NHR9 2005 aa15.51■□□□□ 0.07
CTDSP1-206ENST00000464255 FRMPD3Q5JV73 1810 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 TSPY2A6NKD2 308 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 RANBP6O60518 1105 aaKnown RBP15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 MSCO60682 206 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 PLA2G6O60733 806 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 ZBED4O75132 1171 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 COPB2P35606 906 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 KCTD2Q14681 263 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 ANO1Q5XXA6 986 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 CPXCR1Q8N123 301 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 STAG1Q8WVM7 1258 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 TINF2Q9BSI4 451 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 STX8Q9UNK0 236 aa15.5■□□□□ 0.07
CTDSP1-206ENST00000464255 LAMA2P24043 3122 aaKnown RBP15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 ZNF865P0CJ78 1059 aaPredicted RBP15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 OAZ1P54368 228 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 HAND2P61296 217 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 RCSD1Q6JBY9 416 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 TBC1D10CQ8IV04 446 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 GDF15Q99988 308 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 IL25Q9H293 177 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 TCP11L1Q9NUJ3 509 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 NRBP1Q9UHY1 535 aa15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 ZMYND8Q9ULU4 1186 aaPredicted RBP15.49■□□□□ 0.07
CTDSP1-206ENST00000464255 DNM1LO00429 736 aa15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 SNAI1O95863 264 aaPredicted RBP15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 SLC1A4P43007 532 aa15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 GJC2Q5T442 439 aaPredicted RBP15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 CWC27Q6UX04 472 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 MAMDC4Q6UXC1 1216 aa15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 TMEM47Q9BQJ4 181 aa15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 SENP6Q9GZR1 1112 aaPredicted RBP15.48■□□□□ 0.07
CTDSP1-206ENST00000464255 GSPT1P15170 499 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 SYN1P17600 705 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 STAT2P52630 851 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 SNAP25P60880 206 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 PPP4R3BQ5MIZ7 849 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 AKNAD1Q5T1N1 836 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 TTBK2Q6IQ55 1244 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 FAM160B2Q86V87 743 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 CHST13Q8NET6 341 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 CHURC1Q8WUH1 139 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 PRR12Q9ULL5 1215 aa15.47■□□□□ 0.07
CTDSP1-206ENST00000464255 PLXNA1Q9UIW2 1896 aa15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 FDX1P10109 184 aa15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 BMP8BP34820 402 aa15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 LRRC41Q15345 812 aa15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 RRP12Q5JTH9 1297 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 MSL3Q8N5Y2 521 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 ARRDC4Q8NCT1 418 aa15.46■□□□□ 0.07
CTDSP1-206ENST00000464255 NEDD4P46934 1319 aa15.45■□□□□ 0.06
CTDSP1-206ENST00000464255 SYNGAP1Q96PV0 1343 aa15.45■□□□□ 0.06
CTDSP1-206ENST00000464255 TOP1P11387 765 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-206ENST00000464255 MAGEA10P43363 369 aaPredicted RBP15.45■□□□□ 0.06
CTDSP1-206ENST00000464255 CNTN2Q02246 1040 aa15.45■□□□□ 0.06
CTDSP1-206ENST00000464255 MFSD6Q6ZSS7 791 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms