RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 SH3TC2Q8TF17 1288 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 ZSCAN10Q96SZ4 725 aaPredicted RBP15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 TEX13BQ9BXU2 312 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 SLC38A10Q9HBR0 1119 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 SLC5A4Q9NY91 659 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 ZNF214Q9UL59 606 aaPredicted RBP15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 CTDP1Q9Y5B0 961 aaPredicted RBP15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 B4E1Z4 1266 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 PEX10O60683 326 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 CYP21A2P08686 494 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 STAT3P40763 770 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 PNMA2Q9UL42 364 aa15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 RBM8AQ9Y5S9 174 aaKnown RBP15.36■□□□□ 0.05
R3HDM1-213ENST00000463230 ERCC3P19447 782 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 VASPP50552 380 aaPredicted RBP15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 NKX2-3Q8TAU0 364 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 UBAC1Q9BSL1 405 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 MTA3Q9BTC8 594 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 ZSWIM5Q9P217 1185 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 BIN2Q9UBW5 565 aaPredicted RBP15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 TMEM232C9JQI7 657 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 SNHG28P0DPA3 235 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 MCCP23508 829 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 PLS1Q14651 629 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 NCOA7Q8NI08 942 aa15.35■□□□□ 0.05
R3HDM1-213ENST00000463230 INHAP05111 366 aa15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 ZKSCAN1P17029 563 aaPredicted RBP15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 SOX10P56693 466 aa15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 TKFCQ3LXA3 575 aa15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 GPATCH4Q5T3I0 446 aaKnown RBP15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 WDR78Q5VTH9 848 aa15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 KIFC2Q96AC6 838 aa15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 FBXO40Q9UH90 709 aa15.34■□□□□ 0.05
R3HDM1-213ENST00000463230 FCER1AP12319 257 aa15.33■□□□□ 0.05
R3HDM1-213ENST00000463230 CCDC96Q2M329 555 aa15.33■□□□□ 0.05
R3HDM1-213ENST00000463230 SKAP1Q86WV1 359 aa15.33■□□□□ 0.05
R3HDM1-213ENST00000463230 NCAPG2Q86XI2 1143 aa15.33■□□□□ 0.05
R3HDM1-213ENST00000463230 KAT14Q9H8E8 782 aa15.33■□□□□ 0.05
R3HDM1-213ENST00000463230 TNKSO95271 1327 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 E7EWF7 191 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 PDHBP11177 359 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 CCL5P13501 91 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 ELNP15502 786 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 CYP2B6P20813 491 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 SART3Q15020 963 aaKnown RBP15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 RNF20Q5VTR2 975 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 ENAHQ8N8S7 591 aaPredicted RBP15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 CHST13Q8NET6 341 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 ANO2Q9NQ90 1003 aa15.33■□□□□ 0.04
R3HDM1-213ENST00000463230 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 GJB1P08034 283 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 ZNF543Q08ER8 600 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 OLFML2BQ68BL8 750 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 DIS3Q9Y2L1 958 aaKnown RBP15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 EPB41L2O43491 1005 aaKnown RBP15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 ADORA2AP29274 412 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 NECTIN1Q15223 517 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 MAP3K21Q5TCX8 1036 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 SNRNP48Q6IEG0 339 aaKnown RBP15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 TRIB2Q92519 343 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 MMP19Q99542 508 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 PRR12Q9ULL5 1215 aa15.32■□□□□ 0.04
R3HDM1-213ENST00000463230 ERICH2A1L162 156 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 KCTD2Q14681 263 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 SEC23AQ15436 765 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 IFIT1BQ5T764 474 aaKnown RBP15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 MFSD14CQ5VZR4 134 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 KCTD1Q719H9 257 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 ZNFX1Q9P2E3 1918 aaKnown RBP15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 SLC27A2O14975 620 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 IGHA2P01877 340 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 CREB3L3Q68CJ9 461 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 DPP9Q86TI2 863 aa15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 RANBP17Q9H2T7 1088 aaKnown RBP15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 PAK6Q9NQU5 681 aaPredicted RBP15.31■□□□□ 0.04
R3HDM1-213ENST00000463230 MLLT1Q03111 559 aaPredicted RBP15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 CYB5R4Q7L1T6 521 aa15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 MB21D2Q8IYB1 491 aaPredicted RBP15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 MAF1Q9H063 256 aa15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 RNF208Q9H0X6 261 aa15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 HMX1Q9NP08 348 aaPredicted RBP15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 NRBP1Q9UHY1 535 aa15.3■□□□□ 0.04
R3HDM1-213ENST00000463230 POTEFA5A3E0 1075 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 GJA8P48165 433 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 MTFR1Q15390 333 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 TSGA10IPQ3SY00 556 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 MSL3Q8N5Y2 521 aaKnown RBP15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 UNC93B1Q9H1C4 597 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms