RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 LRIT3Q3SXY7 679 aa28.66■■■□□ 2.18
TTC3-212ENST00000463216 CHMP4CQ96CF2 233 aa28.66■■■□□ 2.18
TTC3-212ENST00000463216 DDX11Q96FC9 970 aa28.66■■■□□ 2.18
TTC3-212ENST00000463216 PRDM5Q9NQX1 630 aaPredicted RBP28.66■■■□□ 2.18
TTC3-212ENST00000463216 TTLL1O95922 423 aa28.65■■■□□ 2.18
TTC3-212ENST00000463216 SLC3A2P08195 630 aaKnown RBP28.65■■■□□ 2.18
TTC3-212ENST00000463216 RARBP10826 455 aa28.65■■■□□ 2.18
TTC3-212ENST00000463216 TAL1P17542 331 aaPredicted RBP28.65■■■□□ 2.18
TTC3-212ENST00000463216 XPNPEP3Q9NQH7 507 aa28.65■■■□□ 2.18
TTC3-212ENST00000463216 MTMR4Q9NYA4 1195 aa28.65■■■□□ 2.18
TTC3-212ENST00000463216 ZMYM1Q5SVZ6 1142 aa28.64■■■□□ 2.18
TTC3-212ENST00000463216 ANKRD45Q5TZF3 282 aa28.64■■■□□ 2.18
TTC3-212ENST00000463216 Q7L0L9 218 aa28.64■■■□□ 2.18
TTC3-212ENST00000463216 RAVER2Q9HCJ3 691 aaKnown RBP28.64■■■□□ 2.18
TTC3-212ENST00000463216 CNPY2Q9Y2B0 182 aa28.64■■■□□ 2.18
TTC3-212ENST00000463216 DIS3Q9Y2L1 958 aaKnown RBP28.64■■■□□ 2.18
TTC3-212ENST00000463216 RIPK3Q9Y572 518 aa28.64■■■□□ 2.18
TTC3-212ENST00000463216 TFAP4Q01664 338 aa28.63■■■□□ 2.17
TTC3-212ENST00000463216 PPARAQ07869 468 aa28.63■■■□□ 2.17
TTC3-212ENST00000463216 TRIM60Q495X7 471 aa28.63■■■□□ 2.17
TTC3-212ENST00000463216 CCDC129Q6ZRS4 1044 aa28.63■■■□□ 2.17
TTC3-212ENST00000463216 DEFB123Q8N688 67 aa28.63■■■□□ 2.17
TTC3-212ENST00000463216 CRBNQ96SW2 442 aa28.63■■■□□ 2.17
TTC3-212ENST00000463216 NRBP1Q9UHY1 535 aa28.63■■■□□ 2.17
TTC3-212ENST00000463216 PGK1P00558 417 aa28.62■■■□□ 2.17
TTC3-212ENST00000463216 SLFN13Q68D06 897 aa28.62■■■□□ 2.17
TTC3-212ENST00000463216 MKL1Q969V6 931 aa28.62■■■□□ 2.17
TTC3-212ENST00000463216 FEM1BQ9UK73 627 aa28.62■■■□□ 2.17
TTC3-212ENST00000463216 NEDD1Q8NHV4 660 aa28.61■■■□□ 2.17
TTC3-212ENST00000463216 LENG1Q96BZ8 264 aaPredicted RBP28.61■■■□□ 2.17
TTC3-212ENST00000463216 BMP3P12645 472 aa28.6■■■□□ 2.17
TTC3-212ENST00000463216 IKQ13123 557 aaPredicted RBP28.6■■■□□ 2.17
TTC3-212ENST00000463216 RNF180Q86T96 592 aa28.6■■■□□ 2.17
TTC3-212ENST00000463216 ZNF865P0CJ78 1059 aaPredicted RBP28.59■■■□□ 2.17
TTC3-212ENST00000463216 AKR1A1P14550 325 aa28.59■■■□□ 2.17
TTC3-212ENST00000463216 CTDSPL2Q05D32 466 aa28.59■■■□□ 2.17
TTC3-212ENST00000463216 ANKRD35Q8N283 1001 aa28.59■■■□□ 2.17
TTC3-212ENST00000463216 GMCL1P1Q8NEA9 526 aa28.59■■■□□ 2.17
TTC3-212ENST00000463216 SLC38A10Q9HBR0 1119 aa28.59■■■□□ 2.17
TTC3-212ENST00000463216 HOMER2Q9NSB8 354 aa28.59■■■□□ 2.17
TTC3-212ENST00000463216 ZHX1Q9UKY1 873 aaPredicted RBP28.59■■■□□ 2.17
TTC3-212ENST00000463216 TMEM232C9JQI7 657 aa28.58■■■□□ 2.17
TTC3-212ENST00000463216 GPR153Q6NV75 609 aa28.58■■■□□ 2.17
TTC3-212ENST00000463216 TSPY2A6NKD2 308 aa28.57■■■□□ 2.16
TTC3-212ENST00000463216 SLC17A8Q8NDX2 589 aa28.57■■■□□ 2.16
TTC3-212ENST00000463216 INCENPQ9NQS7 918 aa28.57■■■□□ 2.16
TTC3-212ENST00000463216 SYNPO2Q9UMS6 1093 aa28.57■■■□□ 2.16
TTC3-212ENST00000463216 STX8Q9UNK0 236 aa28.57■■■□□ 2.16
TTC3-212ENST00000463216 MTMR7Q9Y216 660 aa28.57■■■□□ 2.16
TTC3-212ENST00000463216 ATP2A1O14983 1001 aa28.56■■■□□ 2.16
TTC3-212ENST00000463216 PLIN4Q96Q06 1357 aa28.56■■■□□ 2.16
TTC3-212ENST00000463216 PHF24Q9UPV7 400 aa28.56■■■□□ 2.16
TTC3-212ENST00000463216 LTBP2Q14767 1821 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 MCCP23508 829 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 SLC1A4P43007 532 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 SNX17Q15036 470 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 BADQ92934 168 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 EVI5LQ96CN4 794 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 FBXO40Q9UH90 709 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 FAM184BQ9ULE4 1060 aa28.55■■■□□ 2.16
TTC3-212ENST00000463216 SYNGAP1Q96PV0 1343 aa28.54■■■□□ 2.16
TTC3-212ENST00000463216 SALL3Q9BXA9 1300 aa28.54■■■□□ 2.16
TTC3-212ENST00000463216 SNAI1O95863 264 aaPredicted RBP28.54■■■□□ 2.16
TTC3-212ENST00000463216 STAT2P52630 851 aa28.54■■■□□ 2.16
TTC3-212ENST00000463216 TLE2Q04725 743 aa28.54■■■□□ 2.16
TTC3-212ENST00000463216 SH3RF1Q7Z6J0 888 aa28.54■■■□□ 2.16
TTC3-212ENST00000463216 MSL3Q8N5Y2 521 aaKnown RBP28.54■■■□□ 2.16
TTC3-212ENST00000463216 PDLIM7Q9NR12 457 aa28.54■■■□□ 2.16
TTC3-212ENST00000463216 DNAJC25-GNG10A0A024R161 153 aa28.53■■■□□ 2.16
TTC3-212ENST00000463216 RANBP6O60518 1105 aaKnown RBP28.53■■■□□ 2.16
TTC3-212ENST00000463216 NMT2O60551 498 aa28.53■■■□□ 2.16
TTC3-212ENST00000463216 VPS53Q5VIR6 699 aa28.53■■■□□ 2.16
TTC3-212ENST00000463216 CHST13Q8NET6 341 aa28.53■■■□□ 2.16
TTC3-212ENST00000463216 CHURC1Q8WUH1 139 aa28.53■■■□□ 2.16
TTC3-212ENST00000463216 YTHDC1Q96MU7 727 aaKnown RBP28.53■■■□□ 2.16
TTC3-212ENST00000463216 TOMM22Q9NS69 142 aa28.53■■■□□ 2.16
TTC3-212ENST00000463216 MCM3APO60318 1980 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 A0A1W2PQ45 241 aaPredicted RBP28.52■■■□□ 2.16
TTC3-212ENST00000463216 A0A1W2PQY0 241 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 TRIM43BA6NCK2 446 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 FOXP2O15409 715 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 PQBP1O60828 265 aaKnown RBP28.52■■■□□ 2.16
TTC3-212ENST00000463216 OAZ1P54368 228 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 PPP4R3BQ5MIZ7 849 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 KCTD1Q719H9 257 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 TRIM43Q96BQ3 446 aaPredicted RBP28.52■■■□□ 2.16
TTC3-212ENST00000463216 COL6A3P12111 3177 aa28.52■■■□□ 2.16
TTC3-212ENST00000463216 SYNRGQ9UMZ2 1314 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 PDE1AP54750 535 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 SNAP25P60880 206 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 ACVR2BQ13705 512 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 C1orf53Q5VUE5 145 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 MAMDC4Q6UXC1 1216 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 FAM160B2Q86V87 743 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 STAG1Q8WVM7 1258 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 GMCL1Q96IK5 515 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 AGBL1Q96MI9 1066 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 MTMR10Q9NXD2 777 aa28.51■■■□□ 2.15
TTC3-212ENST00000463216 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.51■■■□□ 2.15
TTC3-212ENST00000463216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.51■■■□□ 2.155e-6■□□□□ 9.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms