RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 LY9Q9HBG7 655 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 RAVER2Q9HCJ3 691 aaKnown RBP19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 HPS5Q9UPZ3 1129 aa19.53■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SH2B2O14492 632 aaPredicted RBP19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ZKSCAN1P17029 563 aaPredicted RBP19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ERCC3P19447 782 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 MCM5P33992 734 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 STAT2P52630 851 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ARHGEF6Q15052 776 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 GPR142Q7Z601 462 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 FAM160B2Q86V87 743 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 CHURC1Q8WUH1 139 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 COA7Q96BR5 231 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 JAKMIP1Q96N16 626 aaKnown RBP19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 SLC38A10Q9HBR0 1119 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 GJD2Q9UKL4 321 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 RIPK3Q9Y572 518 aa19.52■□□□□ 0.72
HLA-DPA1-245ENST00000463066 ZBED4O75132 1171 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MAPK4P31152 587 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 STAT3P40763 770 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CCNA1P78396 465 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 EXOSC10Q01780 885 aaKnown RBP19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PKN2Q16513 984 aaKnown RBP19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 SYDE2Q5VT97 1194 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CCDC174Q6PII3 467 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 BTNL9Q6UXG8 535 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PLEKHH3Q7Z736 793 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 NCAPG2Q86XI2 1143 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 RAB11FIP4Q86YS3 637 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CCAR1Q8IX12 1150 aaKnown RBP19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 STAG2Q8N3U4 1231 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MYL10Q9BUA6 226 aa19.51■□□□□ 0.71
HLA-DPA1-245ENST00000463066 ERICH2A1L162 156 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PLA2G6O60733 806 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 GNRH1P01148 92 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 ELNP15502 786 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 HOXD10P28358 340 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 SART3Q15020 963 aaKnown RBP19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 SNRNP48Q6IEG0 339 aaKnown RBP19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 SH3TC2Q8TF17 1288 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CWC22Q9HCG8 908 aaKnown RBP19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 ZNF536O15090 1300 aa19.5■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CYP2B6P20813 491 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PTPREP23469 700 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 KRT32Q14532 448 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 SLC35G1Q2M3R5 365 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MORN1Q5T089 497 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 DHX32Q7L7V1 743 aaKnown RBP19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 RIOX2Q8IUF8 465 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 SHCBP1Q8NEM2 672 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 RAET1EQ8TD07 263 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 AGBL1Q96MI9 1066 aa19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CTDP1Q9Y5B0 961 aaPredicted RBP19.49■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MGAMO43451 1857 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MYCP01106 439 aaPredicted RBP19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PARP1P09874 1014 aaKnown RBP19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 RXRAP19793 462 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PRMT2P55345 433 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 TROAPQ12815 778 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 GRM4Q14833 912 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 NFXL1Q6ZNB6 911 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 USP6NLQ92738 828 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 TMEM87BQ96K49 555 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 TEX13BQ9BXU2 312 aa19.48■□□□□ 0.71
HLA-DPA1-245ENST00000463066 COL11A1P12107 1806 aaPredicted RBP19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 ASPRV1Q53RT3 343 aa19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 GPATCH4Q5T3I0 446 aaKnown RBP19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 ZNF654Q8IZM8 581 aa19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 NUP133Q8WUM0 1156 aa19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 RANBP17Q9H2T7 1088 aaKnown RBP19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
HLA-DPA1-245ENST00000463066 DOCK3Q8IZD9 2030 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PALM3A6NDB9 673 aaPredicted RBP19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 EPB41L2O43491 1005 aaKnown RBP19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 ADCY3O60266 1144 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CCL14Q16627 93 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 CATIPQ7Z7H3 387 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 NUDT12Q9BQG2 462 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MTA3Q9BTC8 594 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 MROH8Q9H579 483 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 VAT1LQ9HCJ6 419 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 BRPF3Q9ULD4 1205 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 PLXNB2O15031 1838 aa19.46■□□□□ 0.71
HLA-DPA1-245ENST00000463066 SLC15A5A6NIM6 579 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 KLRF2D3W0D1 207 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 ATP2A1O14983 1001 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 COBLO75128 1261 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CAPN15O75808 1086 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 SLC25A27O95847 323 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CASTP20810 708 aaKnown RBP19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 TRIM32Q13049 653 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 MAP2K5Q13163 448 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 IRF5Q13568 498 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 GRB14Q14449 540 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 SLC9C1Q4G0N8 1177 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 BLOC1S2Q6QNY1 142 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 NBPF11Q86T75 865 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms