RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ZBED4O75132 1171 aa22.18■■□□□ 1.14
COL9A3-203ENST00000462700 ZKSCAN1P17029 563 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-203ENST00000462700 ERICH6BQ5W0A0 696 aa22.18■■□□□ 1.14
COL9A3-203ENST00000462700 KCTD1Q719H9 257 aa22.18■■□□□ 1.14
COL9A3-203ENST00000462700 FAM160B2Q86V87 743 aa22.18■■□□□ 1.14
COL9A3-203ENST00000462700 IQCA1Q86XH1 822 aa22.18■■□□□ 1.14
COL9A3-203ENST00000462700 SLC38A10Q9HBR0 1119 aa22.18■■□□□ 1.14
COL9A3-203ENST00000462700 ZSWIM5Q9P217 1185 aa22.18■■□□□ 1.14
COL9A3-203ENST00000462700 ATP2A1O14983 1001 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 PLA2G6O60733 806 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 HOXC6P09630 235 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 ADORA2AP29274 412 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 COPB2P35606 906 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 TRIM32Q13049 653 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 IKQ13123 557 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-203ENST00000462700 CCL14Q16627 93 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 CCDC178Q5BJE1 867 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 DGKHQ86XP1 1220 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 ABRAQ8N0Z2 381 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 CHURC1Q8WUH1 139 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 TEX13BQ9BXU2 312 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 COL11A1P12107 1806 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-203ENST00000462700 ZNF236Q9UL36 1845 aa22.17■■□□□ 1.14
COL9A3-203ENST00000462700 GJB1P08034 283 aa22.16■■□□□ 1.14
COL9A3-203ENST00000462700 FDX1P10109 184 aa22.16■■□□□ 1.14
COL9A3-203ENST00000462700 CCDC96Q2M329 555 aa22.16■■□□□ 1.14
COL9A3-203ENST00000462700 SNRNP48Q6IEG0 339 aaKnown RBP22.16■■□□□ 1.14
COL9A3-203ENST00000462700 KIAA1211Q6ZU35 1233 aa22.16■■□□□ 1.14
COL9A3-203ENST00000462700 ZSCAN10Q96SZ4 725 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-203ENST00000462700 LSG1Q9H089 658 aaKnown RBP22.16■■□□□ 1.14
COL9A3-203ENST00000462700 PPP4R2Q9NY27 417 aa22.16■■□□□ 1.14
COL9A3-203ENST00000462700 CTDP1Q9Y5B0 961 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-203ENST00000462700 RBM8AQ9Y5S9 174 aaKnown RBP22.16■■□□□ 1.14
COL9A3-203ENST00000462700 PDHBP11177 359 aa22.15■■□□□ 1.14
COL9A3-203ENST00000462700 FCER1AP12319 257 aa22.15■■□□□ 1.14
COL9A3-203ENST00000462700 MAP3K21Q5TCX8 1036 aa22.15■■□□□ 1.14
COL9A3-203ENST00000462700 CPXCR1Q8N123 301 aa22.15■■□□□ 1.14
COL9A3-203ENST00000462700 NPLOC4Q8TAT6 608 aa22.15■■□□□ 1.14
COL9A3-203ENST00000462700 RAVER2Q9HCJ3 691 aaKnown RBP22.15■■□□□ 1.14
COL9A3-203ENST00000462700 PAK6Q9NQU5 681 aaPredicted RBP22.15■■□□□ 1.14
COL9A3-203ENST00000462700 TAF6LQ9Y6J9 622 aa22.15■■□□□ 1.14
COL9A3-203ENST00000462700 TNKSO95271 1327 aa22.14■■□□□ 1.14
COL9A3-203ENST00000462700 RPTORQ8N122 1335 aa22.14■■□□□ 1.14
COL9A3-203ENST00000462700 GJA8P48165 433 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 OAZ1P54368 228 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 TRDNQ13061 729 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 DPP9Q86TI2 863 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 ENAHQ8N8S7 591 aaPredicted RBP22.14■■□□□ 1.13
COL9A3-203ENST00000462700 ANKS1AQ92625 1134 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 SHISA4Q96DD7 197 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 MMP19Q99542 508 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 FLRT1Q9NZU1 646 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 RIPK3Q9Y572 518 aa22.14■■□□□ 1.13
COL9A3-203ENST00000462700 FRMPD2Q68DX3 1309 aaPredicted RBP22.13■■□□□ 1.13
COL9A3-203ENST00000462700 COBLO75128 1261 aa22.13■■□□□ 1.13
COL9A3-203ENST00000462700 CDC45O75419 566 aa22.13■■□□□ 1.13
COL9A3-203ENST00000462700 SNHG28P0DPA3 235 aa22.13■■□□□ 1.13
COL9A3-203ENST00000462700 PRKAR2AP13861 404 aaKnown RBP22.13■■□□□ 1.13
COL9A3-203ENST00000462700 CYB5R4Q7L1T6 521 aa22.13■■□□□ 1.13
COL9A3-203ENST00000462700 UBAC1Q9BSL1 405 aa22.13■■□□□ 1.13
COL9A3-203ENST00000462700 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.13■■□□□ 1.134e-7■□□□□ 8.1
COL9A3-203ENST00000462700 HMX1Q9NP08 348 aaPredicted RBP22.13■■□□□ 1.13
COL9A3-203ENST00000462700 PRR12Q9ULL5 1215 aa22.13■■□□□ 1.13
COL9A3-203ENST00000462700 E7EWF7 191 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 CACNB2Q08289 660 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-203ENST00000462700 KCTD2Q14681 263 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 TTBK2Q6IQ55 1244 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 CASC1Q6TDU7 716 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 BTNL9Q6UXG8 535 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 PNMA1Q8ND90 353 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 U2AF1L4Q8WU68 220 aaKnown RBP22.12■■□□□ 1.13
COL9A3-203ENST00000462700 KAT14Q9H8E8 782 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 ANO2Q9NQ90 1003 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 SLC5A4Q9NY91 659 aa22.12■■□□□ 1.13
COL9A3-203ENST00000462700 ZNF536O15090 1300 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 SGPL1O95470 568 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 IGHA2P01877 340 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 SLC16A2P36021 539 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 SLC4A3P48751 1232 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 ZNF543Q08ER8 600 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 MFSD14CQ5VZR4 134 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 STOX1Q6ZVD7 989 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 RALYLQ86SE5 291 aaKnown RBP22.11■■□□□ 1.13
COL9A3-203ENST00000462700 DEFB118Q96PH6 123 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 GPCPD1Q9NPB8 672 aa22.11■■□□□ 1.13
COL9A3-203ENST00000462700 SEC23AQ15436 765 aa22.1■■□□□ 1.13
COL9A3-203ENST00000462700 SYDE2Q5VT97 1194 aa22.1■■□□□ 1.13
COL9A3-203ENST00000462700 OLFML2BQ68BL8 750 aa22.1■■□□□ 1.13
COL9A3-203ENST00000462700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.1■■□□□ 1.13
COL9A3-203ENST00000462700 NCOA7Q8NI08 942 aa22.1■■□□□ 1.13
COL9A3-203ENST00000462700 SNAP25P60880 206 aa22.09■■□□□ 1.13
COL9A3-203ENST00000462700 IFIT1BQ5T764 474 aaKnown RBP22.09■■□□□ 1.13
COL9A3-203ENST00000462700 CHST13Q8NET6 341 aa22.09■■□□□ 1.13
COL9A3-203ENST00000462700 MAML3Q96JK9 1138 aa22.09■■□□□ 1.13
COL9A3-203ENST00000462700 AGBL1Q96MI9 1066 aa22.09■■□□□ 1.13
COL9A3-203ENST00000462700 RANBP17Q9H2T7 1088 aaKnown RBP22.09■■□□□ 1.13
COL9A3-203ENST00000462700 SLC27A2O14975 620 aa22.08■■□□□ 1.13
COL9A3-203ENST00000462700 TNRC18O15417 2968 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-203ENST00000462700 PGK2P07205 417 aa22.08■■□□□ 1.13
COL9A3-203ENST00000462700 CYP2C19P33261 490 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms