RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RWDD1Q9H446 243 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-207ENST00000461798 HELLSQ9NRZ9 838 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 CLIP2Q9UDT6 1046 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 DDX20Q9UHI6 824 aaKnown RBP10.91□□□□□ -0.66
BRCA1-207ENST00000461798 ZNF214Q9UL59 606 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-207ENST00000461798 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 ATP2A1O14983 1001 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 PRDM1O75626 825 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 TTLL1O95922 423 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 FGRP09769 529 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 CYBAP13498 195 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 CYP2C19P33261 490 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 PPARAQ07869 468 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 PLS1Q14651 629 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 STK11IPQ8N1F8 1099 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
BRCA1-207ENST00000461798 GMCL1P1Q8NEA9 526 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 TRPV1Q8NER1 839 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 CEP95Q96GE4 821 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 SLF1Q9BQI6 1058 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 NRBP1Q9UHY1 535 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 ANAPC4Q9UJX5 808 aa10.9□□□□□ -0.66
BRCA1-207ENST00000461798 DIS3Q9Y2L1 958 aaKnown RBP10.9□□□□□ -0.66
BRCA1-207ENST00000461798 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
BRCA1-207ENST00000461798 A0A0G2JMZ2 1700 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 PFASO15067 1338 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 A0A1W2PPC1 479 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 NOVP48745 357 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 TFAP4Q01664 338 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 ZNF792Q3KQV3 632 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 PPP4R3BQ5MIZ7 849 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.89□□□□□ -0.67
BRCA1-207ENST00000461798 MAML3Q96JK9 1138 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
BRCA1-207ENST00000461798 NUP88Q99567 741 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-207ENST00000461798 TEX13BQ9BXU2 312 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 OSBPL3Q9H4L5 887 aa10.89□□□□□ -0.67
BRCA1-207ENST00000461798 RBM27Q9P2N5 1060 aaKnown RBP10.89□□□□□ -0.67
BRCA1-207ENST00000461798 GREB1LQ9C091 1923 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-207ENST00000461798 TRIOBPQ9H2D6 2365 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 SNPHO15079 494 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 SEPT4O43236 478 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 PLA2G6O60733 806 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 IGHDP01880 384 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 TSPY3P0CV98 308 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 TSPY8P0CW00 308 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 FDX1P10109 184 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 BMP8BP34820 402 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 KCTD2Q14681 263 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 MCMDC2Q4G0Z9 681 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 VPS53Q5VIR6 699 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 MMP19Q99542 508 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 GDF15Q99988 308 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 LNPKQ9C0E8 428 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 SLC38A10Q9HBR0 1119 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 FEM1BQ9UK73 627 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
BRCA1-207ENST00000461798 DNM1LO00429 736 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 ORC4O43929 436 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 RAD21O60216 631 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 ZBED4O75132 1171 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 FGAP02671 866 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 BMP3P12645 472 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 CNGA1P29973 690 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 OAZ1P54368 228 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 NUCB1Q02818 461 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 FAM47AQ5JRC9 791 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 SLFN13Q68D06 897 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 CHD1LQ86WJ1 897 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 PLEKHM2Q8IWE5 1019 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 MSL3Q8N5Y2 521 aaKnown RBP10.87□□□□□ -0.67
BRCA1-207ENST00000461798 ARRDC4Q8NCT1 418 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 TINF2Q9BSI4 451 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 IL17RBQ9NRM6 502 aa10.87□□□□□ -0.67
BRCA1-207ENST00000461798 ZMYM6O95789 1325 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 MYH8P13535 1937 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 DNAJC25-GNG10A0A024R161 153 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 A0A0D9SFI3 127 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 PRAMEF19Q5SWL8 479 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 MAMDC4Q6UXC1 1216 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 C7orf61Q8IZ16 206 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 LRRC47Q8N1G4 583 aaKnown RBP10.86□□□□□ -0.67
BRCA1-207ENST00000461798 EXOC6Q8TAG9 804 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 FAM227BQ96M60 508 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 RIPK3Q9Y572 518 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 TACC3Q9Y6A5 838 aa10.86□□□□□ -0.67
BRCA1-207ENST00000461798 PGK2P07205 417 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 HSPD1P10809 573 aaKnown RBP10.85□□□□□ -0.67
BRCA1-207ENST00000461798 NMIQ13287 307 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-207ENST00000461798 LRRC26Q2I0M4 334 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 SNRNP48Q6IEG0 339 aaKnown RBP10.85□□□□□ -0.67
BRCA1-207ENST00000461798 RCSD1Q6JBY9 416 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 B4GALNT3Q6L9W6 998 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms