RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 SBK1Q52WX2 424 aa12.9□□□□□ -0.34
PSMD4-207ENST00000461434 MAP3K21Q5TCX8 1036 aa12.9□□□□□ -0.34
PSMD4-207ENST00000461434 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
PSMD4-207ENST00000461434 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
PSMD4-207ENST00000461434 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
PSMD4-207ENST00000461434 A0A0G2JMZ2 1700 aa12.9□□□□□ -0.34
PSMD4-207ENST00000461434 MYH4Q9Y623 1939 aa12.9□□□□□ -0.35
PSMD4-207ENST00000461434 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
PSMD4-207ENST00000461434 GNAT2P19087 354 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
PSMD4-207ENST00000461434 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 NAPBQ9H115 298 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 C11orf49Q9H6J7 331 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 ZMYND8Q9ULU4 1186 aaPredicted RBP12.89□□□□□ -0.35
PSMD4-207ENST00000461434 PARP14Q460N5 1801 aa12.89□□□□□ -0.35
PSMD4-207ENST00000461434 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 ANO1Q5XXA6 986 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
PSMD4-207ENST00000461434 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 ANKLE1Q8NAG6 615 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
PSMD4-207ENST00000461434 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 OGDHLQ9ULD0 1010 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 GREB1LQ9C091 1923 aaPredicted RBP12.88□□□□□ -0.35
PSMD4-207ENST00000461434 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
PSMD4-207ENST00000461434 COBLO75128 1261 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 NDUFB10O96000 172 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 SYN1P17600 705 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 TRPV1Q8NER1 839 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 CEP95Q96GE4 821 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 MMP19Q99542 508 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
PSMD4-207ENST00000461434 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
PSMD4-207ENST00000461434 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
PSMD4-207ENST00000461434 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 F5H6K3 240 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
PSMD4-207ENST00000461434 PGK2P07205 417 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
PSMD4-207ENST00000461434 HOXC6P09630 235 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
PSMD4-207ENST00000461434 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 PDE4BQ07343 736 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 KLRC3Q07444 240 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 PPARAQ07869 468 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
PSMD4-207ENST00000461434 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 LHX8Q68G74 356 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 SHCBP1Q8NEM2 672 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 KIFC2Q96AC6 838 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 FAM117AQ9C073 453 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 MROH8Q9H579 483 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 STAP2Q9UGK3 403 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
PSMD4-207ENST00000461434 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 PFASO15067 1338 aa12.86□□□□□ -0.35
PSMD4-207ENST00000461434 VWA5AO00534 786 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 STRNO43815 780 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 FCER1AP12319 257 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 CAPN2P17655 700 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 STAT3P40763 770 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 PDE1AP54750 535 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 TFAP4Q01664 338 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 VPS53Q5VIR6 699 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 CPXCR1Q8N123 301 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 RILPL2Q969X0 211 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 SLC5A4Q9NY91 659 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 ZNF236Q9UL36 1845 aa12.85□□□□□ -0.35
PSMD4-207ENST00000461434 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
PSMD4-207ENST00000461434 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
PSMD4-207ENST00000461434 SLC25A27O95847 323 aa12.84□□□□□ -0.35
PSMD4-207ENST00000461434 IER5LQ5T953 404 aa12.84□□□□□ -0.35
PSMD4-207ENST00000461434 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
PSMD4-207ENST00000461434 FAM227BQ96M60 508 aa12.84□□□□□ -0.35
PSMD4-207ENST00000461434 SENP6Q9GZR1 1112 aaPredicted RBP12.84□□□□□ -0.35
PSMD4-207ENST00000461434 TOMM22Q9NS69 142 aa12.84□□□□□ -0.35
PSMD4-207ENST00000461434 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
PSMD4-207ENST00000461434 PLXNA1Q9UIW2 1896 aa12.83□□□□□ -0.36
PSMD4-207ENST00000461434 A0A0D9SFI3 127 aa12.83□□□□□ -0.36
PSMD4-207ENST00000461434 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
PSMD4-207ENST00000461434 TTLL1O95922 423 aa12.83□□□□□ -0.36
PSMD4-207ENST00000461434 CYBAP13498 195 aa12.83□□□□□ -0.36
PSMD4-207ENST00000461434 IKQ13123 557 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms