RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ORAI2Q96SN7 254 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 CEP44Q9C0F1 390 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 RC3H2Q9HBD1 1191 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 RGPD8O14715 1765 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 KNDC1Q76NI1 1749 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 SPATA31A6Q5VVP1 1343 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 TECPR2O15040 1411 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 PTCH1Q13635 1447 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 ADGRL3Q9HAR2 1447 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 ST20-MTHFSA0A0A6YYL1 179 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 GIPC1O14908 333 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 GNA15P30679 374 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 ANGEL2Q5VTE6 544 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 PI4K2BQ8TCG2 481 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 ACSBG1Q96GR2 724 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 HEXIM2Q96MH2 286 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 GTF2IRD1Q9UHL9 959 aa6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 COL16A1Q07092 1604 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-203ENST00000460928 PRR36Q9H6K5 1346 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 FANCGO15287 622 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 CD96P40200 585 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 SLC23A3Q6PIS1 610 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 NT5DC4Q86YG4 428 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 LRRN4CLQ8ND94 238 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 RNF34Q969K3 372 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 FRMD6Q96NE9 622 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 CDK19Q9BWU1 502 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 C19orf44Q9H6X5 657 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 CBX8Q9HC52 389 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 PRDM10Q9NQV6 1147 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 METTL5Q9NRN9 209 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 MSH6P52701 1360 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 GPRASP1Q5JY77 1395 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 SHPRHQ149N8 1683 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 QRICH2Q9H0J4 1663 aa6.52□□□□□ -1.37
ATPAF1-203ENST00000460928 CENPJQ9HC77 1338 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 DLC1Q96QB1 1528 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 HSPA5P11021 654 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 ATF3P18847 181 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 RAD51AP2Q09MP3 1159 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 PPM1JQ5JR12 505 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 ZBTB37Q5TC79 503 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 TPTE2Q6XPS3 522 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 KCT2Q8NC54 265 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 PMFBP1Q8TBY8 1022 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 TMEM40Q8WWA1 233 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 ASB11Q8WXH4 323 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 FAM168AQ92567 244 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 AK5Q9Y6K8 562 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 USP47Q96K76 1375 aa6.51□□□□□ -1.37
ATPAF1-203ENST00000460928 AFF2P51816 1311 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 MST1RQ04912 1400 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 TULP4Q9NRJ4 1543 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 USP32Q8NFA0 1604 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 PAGE1O75459 146 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 ITIH2P19823 946 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 ZNF76P36508 570 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 FANCCQ00597 558 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 LRRC14Q15048 493 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 LLGL2Q6P1M3 1020 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 BRINP3Q76B58 766 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 SPACA3Q8IXA5 215 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 FLAD1Q8NFF5 587 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 TESK2Q96S53 571 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 POLR3GLQ9BT43 218 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 OSBPL7Q9BZF2 842 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 PPP1R1BQ9UD71 204 aaPredicted RBP6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 FMN2Q9NZ56 1722 aa6.5□□□□□ -1.37
ATPAF1-203ENST00000460928 C1orf167Q5SNV9 1468 aa6.49□□□□□ -1.37
ATPAF1-203ENST00000460928 CLCN7P51798 805 aa6.49□□□□□ -1.37
ATPAF1-203ENST00000460928 RBM6P78332 1123 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-203ENST00000460928 SF3A1Q15459 793 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-203ENST00000460928 CYP8B1Q9UNU6 501 aa6.49□□□□□ -1.37
ATPAF1-203ENST00000460928 SPG7Q9UQ90 795 aa6.49□□□□□ -1.37
ATPAF1-203ENST00000460928 DCDC2CA8MYV0 355 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 FARP2O94887 1054 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 CTSHP09668 335 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 NKPD1Q17RQ9 610 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 UBE3DQ7Z6J8 389 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 TGIF2Q9GZN2 237 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 MAPK8IP1Q9UQF2 711 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 CSADQ9Y600 493 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 CDC42BPGQ6DT37 1551 aa6.48□□□□□ -1.37
ATPAF1-203ENST00000460928 EOMESO95936 686 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 EIF4BP23588 611 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 C1QTNF8P60827 252 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 ZNF648Q5T619 568 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 RASIP1Q5U651 963 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 C22orf34Q6ZV56 151 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 C12orf40Q86WS4 652 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 UBXN4Q92575 508 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 SLC12A5Q9H2X9 1139 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 PICK1Q9NRD5 415 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 PCDHA4Q9UN74 947 aa6.47□□□□□ -1.37
ATPAF1-203ENST00000460928 ATP7BP35670 1465 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms