RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 PPIGQ13427 754 aaKnown RBP eCLIP14.1□□□□□ -0.153e-6■■■■□ 24.1
PCYT1A-213ENST00000460827 KCTD2Q14681 263 aa14.1□□□□□ -0.15
PCYT1A-213ENST00000460827 KCNA10Q16322 511 aa14.1□□□□□ -0.15
PCYT1A-213ENST00000460827 VCPKMTQ9H867 229 aa14.1□□□□□ -0.15
PCYT1A-213ENST00000460827 FBXO28Q9NVF7 368 aa14.1□□□□□ -0.15
PCYT1A-213ENST00000460827 ZNF214Q9UL59 606 aaPredicted RBP14.1□□□□□ -0.15
PCYT1A-213ENST00000460827 MAGEB6P1A0A0J9YX57 407 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 SNAI1O95863 264 aaPredicted RBP14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 ACRP10323 421 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 AKR1B1P15121 316 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 ZNF365Q70YC5 407 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 CLUAP1Q96AJ1 413 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 NECAB3Q96P71 396 aaPredicted RBP14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 CRNKL1Q9BZJ0 848 aaKnown RBP14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 ARHGEF10LQ9HCE6 1279 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 CNPY2Q9Y2B0 182 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 ELP1O95163 1332 aa14.09□□□□□ -0.15
PCYT1A-213ENST00000460827 VWA5AO00534 786 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 IPO8O15397 1037 aaKnown RBP14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 ADCY6O43306 1168 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 CST5P28325 142 aaPredicted RBP14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 STAT3P40763 770 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 ICA1Q05084 483 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 CCDC174Q6PII3 467 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 SDR42E1Q8WUS8 393 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 DYNLL2Q96FJ2 89 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 DCP1AQ9NPI6 582 aaPredicted RBP14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 CXXC1Q9P0U4 656 aaPredicted RBP14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 SWAP70Q9UH65 585 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 MROH7Q68CQ1 1323 aa14.08□□□□□ -0.16
PCYT1A-213ENST00000460827 SMIM22K7EJ46 135 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 DUSP11O75319 330 aaKnown RBP14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 BMP1P13497 986 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 PDE6AP16499 860 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 IGFBP4P22692 258 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 RAB30Q15771 203 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 PSRC1Q6PGN9 363 aaPredicted RBP14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 TMEM199Q8N511 208 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 MSL3Q8N5Y2 521 aaKnown RBP14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 HERVK_113Q902F9 699 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 GLT1D1Q96MS3 346 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 SH2D4AQ9H788 454 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 FAM184BQ9ULE4 1060 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 PPP1R9AQ9ULJ8 1098 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 YBX2Q9Y2T7 364 aaKnown RBP14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 SYNGAP1Q96PV0 1343 aa14.07□□□□□ -0.16
PCYT1A-213ENST00000460827 DNAJC25-GNG10A0A024R161 153 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 TCRBV5S4A2TA0A5A2 114 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 ARVCFO00192 962 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 ASGR1P07306 291 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 SLC9C2Q5TAH2 1124 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 MAMDC4Q6UXC1 1216 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 FAM126BQ8IXS8 530 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 LCORLQ8N3X6 602 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 TMEM57Q8N5G2 664 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 PPP1R12CQ9BZL4 782 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 UPF3AQ9H1J1 476 aaKnown RBP14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 NKX2-4Q9H2Z4 354 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 C1orf115Q9H7X2 142 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 MSRAQ9UJ68 235 aa14.06□□□□□ -0.16
PCYT1A-213ENST00000460827 CD4P01730 458 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 C6orf222P0C671 652 aaPredicted RBP14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 EEF2P13639 858 aaKnown RBP14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 CYP2C18P33260 490 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 COPB2P35606 906 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 TFF2Q03403 129 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 IL27Q8NEV9 243 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 C1QTNF1Q9BXJ1 281 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 IL23AQ9NPF7 189 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 ZHX1Q9UKY1 873 aaPredicted RBP14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 RIPK3Q9Y572 518 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 ZNF532Q9HCE3 1301 aa14.05□□□□□ -0.16
PCYT1A-213ENST00000460827 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 CTAGE5O15320 804 aa14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 GJA9P57773 515 aa14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 FAM83BQ5T0W9 1011 aa14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 PCSK9Q8NBP7 692 aaKnown RBP14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 CCDC17Q96LX7 622 aa14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 FGD4Q96M96 766 aa14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 SLC28A3Q9HAS3 691 aa14.04□□□□□ -0.16
PCYT1A-213ENST00000460827 GREB1LQ9C091 1923 aaPredicted RBP14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 CYP2D7A0A087X1C5 515 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 ZNF316A6NFI3 1004 aaPredicted RBP14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 PRKAB2O43741 272 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 CDK8P49336 464 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 ACVR2BQ13705 512 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 TTF1Q15361 905 aaPredicted RBP14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 CCDC144BQ3MJ40 725 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 GNASQ5JWF2 1037 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 AACSQ86V21 672 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 VTI1AQ96AJ9 217 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 VWCEQ96DN2 955 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 TEX13BQ9BXU2 312 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 ARMT1Q9H993 441 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
PCYT1A-213ENST00000460827 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms