RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 ZNF646O15015 1829 aaPredicted RBP15.83■□□□□ 0.12
PTPRN-210ENST00000460801 AFMP43652 599 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 NAPAP54920 295 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 HDLBPQ00341 1268 aaKnown RBP15.83■□□□□ 0.12
PTPRN-210ENST00000460801 NFIAQ12857 509 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 SLC15A2Q16348 729 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 INF2Q27J81 1249 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 ASPRV1Q53RT3 343 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 CT47A1Q5JQC4 288 aaPredicted RBP15.83■□□□□ 0.12
PTPRN-210ENST00000460801 IQUBQ8NA54 791 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 ENOX1Q8TC92 643 aaKnown RBP15.83■□□□□ 0.12
PTPRN-210ENST00000460801 C7orf43Q8WVR3 580 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 CNKSR1Q969H4 720 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 GSDMAQ96QA5 445 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 PIGSQ96S52 555 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 EHD4Q9H223 541 aa15.83■□□□□ 0.12
PTPRN-210ENST00000460801 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
PTPRN-210ENST00000460801 GREB1LQ9C091 1923 aaPredicted RBP15.82■□□□□ 0.12
PTPRN-210ENST00000460801 TTLL1O95922 423 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 HLA-DOAP06340 250 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 CHRNA5P30532 468 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 FMR1Q06787 632 aaKnown RBP eCLIP15.82■□□□□ 0.12
PTPRN-210ENST00000460801 HOMER1Q86YM7 354 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 C6orf50Q9HD87 102 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 SMCO2A6NFE2 343 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 CBFA2T2O43439 604 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 ECE2O60344 883 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 ERCC5P28715 1186 aaPredicted RBP15.82■□□□□ 0.12
PTPRN-210ENST00000460801 GNA11P29992 359 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 UBASH3AP57075 661 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 CCZ1BP86790 482 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 CCZ1P86791 482 aaPredicted RBP15.82■□□□□ 0.12
PTPRN-210ENST00000460801 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 KRT25Q7Z3Z0 450 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 TMC6Q7Z403 805 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 MED15Q96RN5 788 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 VAT1LQ9HCJ6 419 aa15.82■□□□□ 0.12
PTPRN-210ENST00000460801 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
PTPRN-210ENST00000460801 hCG_1984214I3L0E3 225 aa15.81■□□□□ 0.12
PTPRN-210ENST00000460801 LAD1O00515 517 aa15.81■□□□□ 0.12
PTPRN-210ENST00000460801 KIAA0825Q8IV33 1275 aa15.81■□□□□ 0.12
PTPRN-210ENST00000460801 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
PTPRN-210ENST00000460801 ZNF713Q8N859 430 aaPredicted RBP15.81■□□□□ 0.12
PTPRN-210ENST00000460801 DPF2Q92785 391 aa15.81■□□□□ 0.12
PTPRN-210ENST00000460801 CAMKK2Q96RR4 588 aa15.81■□□□□ 0.12
PTPRN-210ENST00000460801 TMEM60Q9H2L4 133 aa15.81■□□□□ 0.12
PTPRN-210ENST00000460801 SERPINC1P01008 464 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 SKILP12757 684 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 ZNF18P17022 549 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 PRPHP41219 470 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 DHX8Q14562 1220 aaKnown RBP15.8■□□□□ 0.12
PTPRN-210ENST00000460801 DTHD1Q6ZMT9 781 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 CLEC10AQ8IUN9 316 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 ZFPM1Q8IX07 1006 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 IDI2Q9BXS1 227 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
PTPRN-210ENST00000460801 CASP1P29466 404 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 EIF6P56537 245 aaKnown RBP15.8■□□□□ 0.12
PTPRN-210ENST00000460801 SOGA3Q5TF21 947 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 CCDC150Q8NCX0 1101 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 PRIMPOLQ96LW4 560 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 CCDC17Q96LX7 622 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 MTRQ99707 1265 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 DHX36Q9H2U1 1008 aaKnown RBP15.8■□□□□ 0.12
PTPRN-210ENST00000460801 NFE2L3Q9Y4A8 694 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 PCDHAC2Q9Y5I4 1007 aa15.8■□□□□ 0.12
PTPRN-210ENST00000460801 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
PTPRN-210ENST00000460801 ZNF543Q08ER8 600 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 NONOQ15233 471 aaKnown RBP eCLIP15.79■□□□□ 0.12
PTPRN-210ENST00000460801 EZH2Q15910 746 aaKnown RBP15.79■□□□□ 0.12
PTPRN-210ENST00000460801 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
PTPRN-210ENST00000460801 SIPA1L1O43166 1804 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 TXLNAP40222 546 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 ARMCX5Q6P1M9 558 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 DNAJC18Q9H819 358 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 FAM198AQ9UFP1 575 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 SERPINA10Q9UK55 444 aa15.79■□□□□ 0.12
PTPRN-210ENST00000460801 GTPBP6O43824 516 aaPredicted RBP15.78■□□□□ 0.12
PTPRN-210ENST00000460801 CUL4BQ13620 913 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 CFAP100Q494V2 611 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 PPP4R3BQ5MIZ7 849 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 CC2D2BQ6DHV5 1058 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 VSTM4Q8IW00 320 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 TRMT44Q8IYL2 757 aaKnown RBP15.78■□□□□ 0.12
PTPRN-210ENST00000460801 MYH4Q9Y623 1939 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
PTPRN-210ENST00000460801 CDC25AP30304 524 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 CACNB3P54284 484 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 EN1Q05925 392 aaPredicted RBP15.78■□□□□ 0.12
PTPRN-210ENST00000460801 AOC3Q16853 763 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 STAMQ92783 540 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 CCSER1Q9C0I3 900 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 DISC1Q9NRI5 854 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 KCND1Q9NSA2 647 aa15.78■□□□□ 0.12
PTPRN-210ENST00000460801 RGS17Q9UGC6 210 aaPredicted RBP15.78■□□□□ 0.12
PTPRN-210ENST00000460801 UQCRHLA0A096LP55 91 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 DDTLA6NHG4 134 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms