RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 SLF1Q9BQI6 1058 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 GOPCQ9HD26 462 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 XPNPEP3Q9NQH7 507 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 INCENPQ9NQS7 918 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
VAMP7-203ENST00000460621 CLIP2Q9UDT6 1046 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 DIS3Q9Y2L1 958 aaKnown RBP13.1□□□□□ -0.31
VAMP7-203ENST00000460621 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 PLXNA1Q9UIW2 1896 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 KCTD2Q14681 263 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 MKL1Q969V6 931 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 RAVER2Q9HCJ3 691 aaKnown RBP13.09□□□□□ -0.31
VAMP7-203ENST00000460621 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 UNC80Q8N2C7 3258 aa13.09□□□□□ -0.31
VAMP7-203ENST00000460621 CDH23Q9H251 3354 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.32
VAMP7-203ENST00000460621 AMOTL1Q8IY63 956 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 CPXCR1Q8N123 301 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 KLHDC9Q8NEP7 349 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 TTYH1Q9H313 450 aaPredicted RBP13.08□□□□□ -0.32
VAMP7-203ENST00000460621 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
VAMP7-203ENST00000460621 DDX49Q9Y6V7 483 aaKnown RBP13.08□□□□□ -0.32
VAMP7-203ENST00000460621 A0A1W2PQ45 241 aaPredicted RBP13.07□□□□□ -0.32
VAMP7-203ENST00000460621 A0A1W2PQY0 241 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
VAMP7-203ENST00000460621 ATP2A1O14983 1001 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 CTAGE5O15320 804 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 RARBP10826 455 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 PTGS1P23219 599 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 MAMDC4Q6UXC1 1216 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 RASGRP2Q7LDG7 609 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
VAMP7-203ENST00000460621 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
VAMP7-203ENST00000460621 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 TEX13BQ9BXU2 312 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 KATNBL1Q9H079 304 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 SEMA6BQ9H3T3 888 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
VAMP7-203ENST00000460621 SLC38A10Q9HBR0 1119 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 SYNRGQ9UMZ2 1314 aa13.07□□□□□ -0.32
VAMP7-203ENST00000460621 KIAA0355O15063 1070 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 FAAP100Q0VG06 881 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 CCDC129Q6ZRS4 1044 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
VAMP7-203ENST00000460621 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 CDX2Q99626 313 aaPredicted RBP13.06□□□□□ -0.32
VAMP7-203ENST00000460621 PRKAG2Q9UGJ0 569 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 EYSQ5T1H1 3165 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 ZNF536O15090 1300 aa13.06□□□□□ -0.32
VAMP7-203ENST00000460621 MCM3APO60318 1980 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 PQBP1O60828 265 aaKnown RBP13.05□□□□□ -0.32
VAMP7-203ENST00000460621 CLTBP09497 229 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 AKR1A1P14550 325 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 TDO2P48775 406 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 ACLYP53396 1101 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 CNTN2Q02246 1040 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 KCNA10Q16322 511 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 TMEM63BQ5T3F8 832 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 C16orf59Q7L2K0 433 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 COL25A1Q9BXS0 654 aaPredicted RBP13.05□□□□□ -0.32
VAMP7-203ENST00000460621 IL17RBQ9NRM6 502 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 ASTN1O14525 1302 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 SALL3Q9BXA9 1300 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 MYH4Q9Y623 1939 aa13.05□□□□□ -0.32
VAMP7-203ENST00000460621 VCANP13611 3396 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 NMT2O60551 498 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 APPP05067 770 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 ZFYP08048 801 aaPredicted RBP13.04□□□□□ -0.32
VAMP7-203ENST00000460621 COPB2P35606 906 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 CDK7P50613 346 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 SNAP25P60880 206 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 TFAP4Q01664 338 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 ACVR2BQ13705 512 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 SLFN13Q68D06 897 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 ANKRD33Q7Z3H0 272 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 RNF180Q86T96 592 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 ZNF444Q8N0Y2 327 aaPredicted RBP13.04□□□□□ -0.32
VAMP7-203ENST00000460621 GMCL1P1Q8NEA9 526 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.04□□□□□ -0.32
VAMP7-203ENST00000460621 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
VAMP7-203ENST00000460621 SYNGAP1Q96PV0 1343 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
VAMP7-203ENST00000460621 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.03□□□□□ -0.32
VAMP7-203ENST00000460621 SOWAHBA6NEL2 793 aa13.03□□□□□ -0.32
VAMP7-203ENST00000460621 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
VAMP7-203ENST00000460621 ZBED4O75132 1171 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms