RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ISY1Q9ULR0 285 aaKnown RBP27.14■■□□□ 1.94
PTPN4-208ENST00000460289 RAD50Q92878 1312 aa27.14■■□□□ 1.93
PTPN4-208ENST00000460289 TMEM232C9JQI7 657 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 ATP2A1O14983 1001 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 STAT2P52630 851 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 IMMTQ16891 758 aaKnown RBP27.13■■□□□ 1.93
PTPN4-208ENST00000460289 PRPF38BQ5VTL8 546 aaKnown RBP27.13■■□□□ 1.93
PTPN4-208ENST00000460289 RCSD1Q6JBY9 416 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 FAM160B2Q86V87 743 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 TBC1D10CQ8IV04 446 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 ESR2Q92731 530 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 TTC14Q96N46 770 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 FLRT1Q9NZU1 646 aa27.13■■□□□ 1.93
PTPN4-208ENST00000460289 FARP2O94887 1054 aaPredicted RBP27.12■■□□□ 1.93
PTPN4-208ENST00000460289 KCTD2Q14681 263 aa27.12■■□□□ 1.93
PTPN4-208ENST00000460289 UBE2Q1Q7Z7E8 422 aa27.12■■□□□ 1.93
PTPN4-208ENST00000460289 MMP19Q99542 508 aa27.12■■□□□ 1.93
PTPN4-208ENST00000460289 SLC38A10Q9HBR0 1119 aa27.12■■□□□ 1.93
PTPN4-208ENST00000460289 MKI67P46013 3256 aaKnown RBP27.12■■□□□ 1.93
PTPN4-208ENST00000460289 PLA2G6O60733 806 aa27.11■■□□□ 1.93
PTPN4-208ENST00000460289 COBLO75128 1261 aa27.11■■□□□ 1.93
PTPN4-208ENST00000460289 TOP1P11387 765 aaKnown RBP27.11■■□□□ 1.93
PTPN4-208ENST00000460289 CHMLP26374 656 aa27.11■■□□□ 1.93
PTPN4-208ENST00000460289 IKQ13123 557 aaPredicted RBP27.11■■□□□ 1.93
PTPN4-208ENST00000460289 OLFML2BQ68BL8 750 aa27.11■■□□□ 1.93
PTPN4-208ENST00000460289 SNRNP48Q6IEG0 339 aaKnown RBP27.11■■□□□ 1.93
PTPN4-208ENST00000460289 CENPQQ7L2Z9 268 aaPredicted RBP27.11■■□□□ 1.93
PTPN4-208ENST00000460289 ANKLE1Q8NAG6 615 aa27.11■■□□□ 1.93
PTPN4-208ENST00000460289 OAZ1P54368 228 aa27.1■■□□□ 1.93
PTPN4-208ENST00000460289 CPXCR1Q8N123 301 aa27.1■■□□□ 1.93
PTPN4-208ENST00000460289 DCAF4Q8WV16 495 aa27.1■■□□□ 1.93
PTPN4-208ENST00000460289 TMEM47Q9BQJ4 181 aa27.1■■□□□ 1.93
PTPN4-208ENST00000460289 CCDC178Q5BJE1 867 aa27.09■■□□□ 1.93
PTPN4-208ENST00000460289 HTATIP2Q9BUP3 242 aa27.09■■□□□ 1.93
PTPN4-208ENST00000460289 COL11A1P12107 1806 aaPredicted RBP27.09■■□□□ 1.93
PTPN4-208ENST00000460289 ZNF236Q9UL36 1845 aa27.09■■□□□ 1.93
PTPN4-208ENST00000460289 IGHA2P01877 340 aa27.08■■□□□ 1.93
PTPN4-208ENST00000460289 CCND3P30281 292 aaPredicted RBP27.08■■□□□ 1.93
PTPN4-208ENST00000460289 CYP2C19P33261 490 aa27.08■■□□□ 1.93
PTPN4-208ENST00000460289 KCTD1Q719H9 257 aa27.08■■□□□ 1.93
PTPN4-208ENST00000460289 CHMP4CQ96CF2 233 aa27.08■■□□□ 1.93
PTPN4-208ENST00000460289 IL25Q9H293 177 aa27.08■■□□□ 1.93
PTPN4-208ENST00000460289 RAVER2Q9HCJ3 691 aaKnown RBP27.08■■□□□ 1.93
PTPN4-208ENST00000460289 OGDHLQ9ULD0 1010 aa27.08■■□□□ 1.93
PTPN4-208ENST00000460289 DIS3Q9Y2L1 958 aaKnown RBP27.08■■□□□ 1.93
PTPN4-208ENST00000460289 NEDD4P46934 1319 aa27.08■■□□□ 1.93
PTPN4-208ENST00000460289 SLC4A3P48751 1232 aa27.07■■□□□ 1.92
PTPN4-208ENST00000460289 IQCA1Q86XH1 822 aa27.07■■□□□ 1.92
PTPN4-208ENST00000460289 DGKHQ86XP1 1220 aa27.07■■□□□ 1.92
PTPN4-208ENST00000460289 FBXO40Q9UH90 709 aa27.07■■□□□ 1.92
PTPN4-208ENST00000460289 MTMR7Q9Y216 660 aa27.07■■□□□ 1.92
PTPN4-208ENST00000460289 RIPK3Q9Y572 518 aa27.07■■□□□ 1.92
PTPN4-208ENST00000460289 MAML3Q96JK9 1138 aa27.06■■□□□ 1.92
PTPN4-208ENST00000460289 KRT23Q9C075 422 aa27.06■■□□□ 1.92
PTPN4-208ENST00000460289 CNNM2Q9H8M5 875 aa27.06■■□□□ 1.92
PTPN4-208ENST00000460289 MSCO60682 206 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 KDM4AO75164 1064 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 CCDC96Q2M329 555 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 LHX8Q68G74 356 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 NECAB2Q7Z6G3 386 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 CHST13Q8NET6 341 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 DPF3Q92784 378 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 DDX11Q96FC9 970 aa27.05■■□□□ 1.92
PTPN4-208ENST00000460289 SGSM2O43147 1006 aa27.04■■□□□ 1.92
PTPN4-208ENST00000460289 PGK2P07205 417 aa27.04■■□□□ 1.92
PTPN4-208ENST00000460289 CNGA1P29973 690 aa27.04■■□□□ 1.92
PTPN4-208ENST00000460289 ZNF792Q3KQV3 632 aa27.04■■□□□ 1.92
PTPN4-208ENST00000460289 PAWRQ96IZ0 340 aaKnown RBP27.04■■□□□ 1.92
PTPN4-208ENST00000460289 CYBAP13498 195 aa27.03■■□□□ 1.92
PTPN4-208ENST00000460289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.03■■□□□ 1.92
PTPN4-208ENST00000460289 ZKSCAN3Q9BRR0 538 aa27.03■■□□□ 1.92
PTPN4-208ENST00000460289 PRR12Q9ULL5 1215 aa27.03■■□□□ 1.92
PTPN4-208ENST00000460289 B4E1Z4 1266 aa27.02■■□□□ 1.92
PTPN4-208ENST00000460289 BTNL9Q6UXG8 535 aa27.02■■□□□ 1.92
PTPN4-208ENST00000460289 ANKRD35Q8N283 1001 aa27.02■■□□□ 1.92
PTPN4-208ENST00000460289 ZSWIM5Q9P217 1185 aa27.02■■□□□ 1.92
PTPN4-208ENST00000460289 DDX20Q9UHI6 824 aaKnown RBP27.02■■□□□ 1.92
PTPN4-208ENST00000460289 U3KPZ7 1027 aaPredicted RBP27.02■■□□□ 1.92
PTPN4-208ENST00000460289 TKFCQ3LXA3 575 aa27.01■■□□□ 1.91
PTPN4-208ENST00000460289 ANKS1AQ92625 1134 aa27.01■■□□□ 1.91
PTPN4-208ENST00000460289 ZSCAN10Q96SZ4 725 aaPredicted RBP27.01■■□□□ 1.91
PTPN4-208ENST00000460289 TINF2Q9BSI4 451 aa27.01■■□□□ 1.91
PTPN4-208ENST00000460289 NRBP1Q9UHY1 535 aa27.01■■□□□ 1.91
PTPN4-208ENST00000460289 ZNFX1Q9P2E3 1918 aaKnown RBP27■■□□□ 1.91
PTPN4-208ENST00000460289 LAMA4Q16363 1823 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 ZNF536O15090 1300 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 PDHBP11177 359 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 PTH1RQ03431 593 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 TRDNQ13061 729 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 RASGRP2Q7LDG7 609 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 MSL3Q8N5Y2 521 aaKnown RBP27■■□□□ 1.91
PTPN4-208ENST00000460289 TRPV1Q8NER1 839 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 DIS3LQ8TF46 1054 aaKnown RBP27■■□□□ 1.91
PTPN4-208ENST00000460289 AGBL1Q96MI9 1066 aa27■■□□□ 1.91
PTPN4-208ENST00000460289 MNX1P50219 401 aaPredicted RBP26.99■■□□□ 1.91
PTPN4-208ENST00000460289 TTBK2Q6IQ55 1244 aa26.99■■□□□ 1.91
PTPN4-208ENST00000460289 UBAC1Q9BSL1 405 aa26.99■■□□□ 1.91
PTPN4-208ENST00000460289 C11orf49Q9H6J7 331 aa26.99■■□□□ 1.91
PTPN4-208ENST00000460289 ACAD9Q9H845 621 aa26.99■■□□□ 1.91
PTPN4-208ENST00000460289 KAT14Q9H8E8 782 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms