RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 VAMP4O75379 141 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 ZNF865P0CJ78 1059 aaPredicted RBP7.89□□□□□ -1.15
CCDC50-203ENST00000460064 NMIQ13287 307 aaPredicted RBP7.89□□□□□ -1.15
CCDC50-203ENST00000460064 TKFCQ3LXA3 575 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 TAF7LQ5H9L4 462 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 GPAT2Q6NUI2 795 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 NSMFQ6X4W1 530 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 MFSD4AQ8N468 514 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 ZDHHC15Q96MV8 337 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 CHST7Q9NS84 486 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 CAPN6Q9Y6Q1 641 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 GDF11O95390 407 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 PRAMEF1O95521 474 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 C21orf62-AS1Q17RA5 79 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 PLA2G4EQ3MJ16 856 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 PIWIL2Q8TC59 973 aaKnown RBP7.88□□□□□ -1.15
CCDC50-203ENST00000460064 ENOX1Q8TC92 643 aaKnown RBP7.88□□□□□ -1.15
CCDC50-203ENST00000460064 BTN2A2Q8WVV5 523 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 EXOC2Q96KP1 924 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 DBNDD2Q9BQY9 259 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 OSBPL1AQ9BXW6 950 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 CD2APQ9Y5K6 639 aa7.88□□□□□ -1.15
CCDC50-203ENST00000460064 SHISA3A0PJX4 238 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 PPM1GO15355 546 aaPredicted RBP7.87□□□□□ -1.15
CCDC50-203ENST00000460064 HMGB1P09429 215 aaKnown RBP7.87□□□□□ -1.15
CCDC50-203ENST00000460064 FGFR1P11362 822 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 PABPC1P11940 636 aaKnown RBP7.87□□□□□ -1.15
CCDC50-203ENST00000460064 DOC2BQ14184 412 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 DPY19L1Q2PZI1 675 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 CDKAL1Q5VV42 579 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 CWF19L1Q69YN2 538 aaKnown RBP7.87□□□□□ -1.15
CCDC50-203ENST00000460064 GTF2IRD2BQ6EKJ0 949 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 FILIP1Q7Z7B0 1213 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 GTF2IRD2Q86UP8 949 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 SHKBP1Q8TBC3 707 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 KISS1RQ969F8 398 aaPredicted RBP7.87□□□□□ -1.15
CCDC50-203ENST00000460064 IER2Q9BTL4 223 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 METTL22Q9BUU2 404 aaPredicted RBP7.87□□□□□ -1.15
CCDC50-203ENST00000460064 LRRC4CQ9HCJ2 640 aa7.87□□□□□ -1.15
CCDC50-203ENST00000460064 MRPS23Q9Y3D9 190 aaKnown RBP7.87□□□□□ -1.15
CCDC50-203ENST00000460064 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 CAPNS1P04632 268 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 ITIH2P19823 946 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 HOXC12P31275 282 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 KCNJ6P48051 423 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 GSK3AP49840 483 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 AMPD2Q01433 879 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 POU4F1Q01851 419 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 GRB10Q13322 594 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 CBX2Q14781 532 aaPredicted RBP7.86□□□□□ -1.15
CCDC50-203ENST00000460064 TMEM151AQ8N4L1 468 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 FAM181AQ8N9Y4 354 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 GPR62Q9BZJ7 368 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 IFT57Q9NWB7 429 aa7.86□□□□□ -1.15
CCDC50-203ENST00000460064 GPR55Q9Y2T6 319 aaPredicted RBP7.86□□□□□ -1.15
CCDC50-203ENST00000460064 H0Y8X5 98 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 GSC2O15499 205 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 GSNP06396 782 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 HSP90B1P14625 803 aaKnown RBP7.85□□□□□ -1.15
CCDC50-203ENST00000460064 OXCT1P55809 520 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 SF1Q15637 639 aaKnown RBP7.85□□□□□ -1.15
CCDC50-203ENST00000460064 DAGLBQ8NCG7 672 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 OSBP2Q969R2 916 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 CCDC140Q96MF4 163 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 DUSP15Q9H1R2 295 aaPredicted RBP7.85□□□□□ -1.15
CCDC50-203ENST00000460064 TRIT1Q9H3H1 467 aaKnown RBP7.85□□□□□ -1.15
CCDC50-203ENST00000460064 SPC25Q9HBM1 224 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 CYP26B1Q9NR63 512 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 GPATCH2Q9NW75 528 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 PRKAB1Q9Y478 270 aa7.85□□□□□ -1.15
CCDC50-203ENST00000460064 DLX3O60479 287 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 DNAJC6O75061 913 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 ITGB2P05107 769 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 SNRPB2P08579 225 aaKnown RBP7.84□□□□□ -1.15
CCDC50-203ENST00000460064 FSTP19883 344 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 ECI1P42126 302 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 NOP2P46087 812 aaKnown RBP7.84□□□□□ -1.15
CCDC50-203ENST00000460064 SUMO1P63165 101 aaKnown RBP7.84□□□□□ -1.15
CCDC50-203ENST00000460064 NKPD1Q17RQ9 610 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 DALRD3Q5D0E6 543 aaKnown RBP7.84□□□□□ -1.15
CCDC50-203ENST00000460064 ZNF655Q8N720 491 aaPredicted RBP7.84□□□□□ -1.15
CCDC50-203ENST00000460064 KCTD13Q8WZ19 329 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 HDAC8Q9BY41 377 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 NKX2-4Q9H2Z4 354 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 MKNK2Q9HBH9 465 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 NCOA5Q9HCD5 579 aaKnown RBP7.84□□□□□ -1.15
CCDC50-203ENST00000460064 ST14Q9Y5Y6 855 aa7.84□□□□□ -1.15
CCDC50-203ENST00000460064 DNAJC25-GNG10A0A024R161 153 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 PLD2O14939 933 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 CYP26A1O43174 497 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 RAPGEF3O95398 923 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 H2AFB2P0C5Z0 115 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 SRFP11831 508 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 CTSKP43235 329 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 PTPROQ16827 1216 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 TCTN2Q96GX1 697 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 ZSWIM5Q9P217 1185 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms