RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 RCAN3Q9UKA8 241 aa14.77□□□□□ -0.05
GPNMB-204ENST00000459927 FAM184BQ9ULE4 1060 aa14.77□□□□□ -0.05
GPNMB-204ENST00000459927 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.05
GPNMB-204ENST00000459927 COL11A1P12107 1806 aaPredicted RBP14.77□□□□□ -0.05
GPNMB-204ENST00000459927 A0A0G2JMZ2 1700 aa14.77□□□□□ -0.05
GPNMB-204ENST00000459927 DNAJC25-GNG10A0A024R161 153 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 ATP2A1O14983 1001 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 RNF113AO15541 343 aaKnown RBP14.76□□□□□ -0.05
GPNMB-204ENST00000459927 ZBED4O75132 1171 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 ADAMTS4O75173 837 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 CLTBP09497 229 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 EPHB4P54760 987 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 C20orf194Q5TEA3 1177 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 CCSAPQ6IQ19 270 aaPredicted RBP14.76□□□□□ -0.05
GPNMB-204ENST00000459927 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.76□□□□□ -0.05
GPNMB-204ENST00000459927 KBTBD3Q8NAB2 608 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 TEX13BQ9BXU2 312 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 PARP14Q460N5 1801 aa14.76□□□□□ -0.05
GPNMB-204ENST00000459927 IGKV6D-41A0A0C4DH26 115 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 A0A1W2PQ45 241 aaPredicted RBP14.75□□□□□ -0.05
GPNMB-204ENST00000459927 A0A1W2PQY0 241 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 PATL2C9JE40 543 aaKnown RBP14.75□□□□□ -0.05
GPNMB-204ENST00000459927 NDUFB10O96000 172 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 RAG1P15918 1043 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 SLC4A3P48751 1232 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 ACLYP53396 1101 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 FAAP100Q0VG06 881 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 KCNA10Q16322 511 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 SNRNP48Q6IEG0 339 aaKnown RBP14.75□□□□□ -0.05
GPNMB-204ENST00000459927 ANKRD33Q7Z3H0 272 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 CPXCR1Q8N123 301 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 TTYH1Q9H313 450 aaPredicted RBP14.75□□□□□ -0.05
GPNMB-204ENST00000459927 TMEM39AQ9NV64 488 aa14.75□□□□□ -0.05
GPNMB-204ENST00000459927 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
GPNMB-204ENST00000459927 DUSP11O75319 330 aaKnown RBP14.74□□□□□ -0.05
GPNMB-204ENST00000459927 ZNF467Q7Z7K2 595 aaPredicted RBP14.74□□□□□ -0.05
GPNMB-204ENST00000459927 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
GPNMB-204ENST00000459927 APPBP2Q92624 585 aa14.74□□□□□ -0.05
GPNMB-204ENST00000459927 RAVER2Q9HCJ3 691 aaKnown RBP14.74□□□□□ -0.05
GPNMB-204ENST00000459927 MTMR4Q9NYA4 1195 aa14.74□□□□□ -0.05
GPNMB-204ENST00000459927 PLXNA1Q9UIW2 1896 aa14.74□□□□□ -0.05
GPNMB-204ENST00000459927 LTBP2Q14767 1821 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 MOXD2PA6NHM9 499 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 DCDC2CA8MYV0 355 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 PQBP1O60828 265 aaKnown RBP14.73□□□□□ -0.05
GPNMB-204ENST00000459927 APPP05067 770 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 ZFYP08048 801 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-204ENST00000459927 CDK7P50613 346 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 ACVR2BQ13705 512 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 IFNL3Q8IZI9 196 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 KIFC2Q96AC6 838 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 LENG1Q96BZ8 264 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-204ENST00000459927 SLC38A10Q9HBR0 1119 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 ZNF287Q9HBT7 754 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 FEM1BQ9UK73 627 aa14.73□□□□□ -0.05
GPNMB-204ENST00000459927 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-204ENST00000459927 CUL9Q8IWT3 2517 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.72□□□□□ -0.05
GPNMB-204ENST00000459927 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.72□□□□□ -0.05
GPNMB-204ENST00000459927 GPAA1O43292 621 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 PRDM1O75626 825 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 TIMP1P01033 207 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 GNAT2P19087 354 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
GPNMB-204ENST00000459927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.72□□□□□ -0.05
GPNMB-204ENST00000459927 ANKRD35Q8N283 1001 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 CHST13Q8NET6 341 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 CEP95Q96GE4 821 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 ABHD16BQ9H3Z7 469 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 SYNPO2Q9UMS6 1093 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 UNC80Q8N2C7 3258 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 MYH7P12883 1935 aa14.72□□□□□ -0.05
GPNMB-204ENST00000459927 ELP1O95163 1332 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 SYNRGQ9UMZ2 1314 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 MYADML2A6NDP7 307 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 TTLL1O95922 423 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 FPGSQ05932 587 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 SLFN13Q68D06 897 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
GPNMB-204ENST00000459927 NEDD1Q8NHV4 660 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 MYLIPQ8WY64 445 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 RNPC3Q96LT9 517 aaKnown RBP14.71□□□□□ -0.05
GPNMB-204ENST00000459927 FGD4Q96M96 766 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 EPB41L4AQ9HCS5 686 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-204ENST00000459927 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-204ENST00000459927 FBXO40Q9UH90 709 aa14.71□□□□□ -0.05
GPNMB-204ENST00000459927 ZHX1Q9UKY1 873 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-204ENST00000459927 M0R2C6 588 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 ASGR1P07306 291 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 FDX1P10109 184 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 BMP3P12645 472 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 CST5P28325 142 aaPredicted RBP14.7□□□□□ -0.06
GPNMB-204ENST00000459927 TDO2P48775 406 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 OAZ1P54368 228 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 GJA9P57773 515 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 CCDC144BQ3MJ40 725 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 GNASQ5JWF2 1037 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 TSHZ3Q63HK5 1081 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 C16orf59Q7L2K0 433 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms