RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 USP17L10C9JJH3 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L13C9JLJ4 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L12C9JPN9 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L11C9JVI0 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L21D6R901 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L18D6R9N7 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L22D6RA61 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L17D6RBQ6 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L19D6RCP7 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L20D6RJB6 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 RHOBTB3O94955 611 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 PDGFAP04085 211 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 POLR3DP05423 398 aaPredicted RBP1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 ATF2P15336 505 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 MZF1P28698 734 aaPredicted RBP1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP5P45974 858 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 ETF1P62495 437 aaKnown RBP1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 PPP2CBP62714 309 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 PPP2CAP67775 309 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 USP17L24Q0WX57 530 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 TUBA3CQ13748 450 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 STRIP1Q5VSL9 837 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 ATG9BQ674R7 924 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 SLFN13Q68D06 897 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 TUBA3EQ6PEY2 450 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 RNF111Q6ZNA4 994 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 GAREM2Q75VX8 874 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 ATCAYQ86WG3 371 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 HID1Q8IV36 788 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 C1orf210Q8IVY1 113 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 SULF2Q8IWU5 870 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 ZNF366Q8N895 744 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 NUP43Q8NFH3 380 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 Q8TCH9 128 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 ZNF483Q8TF39 744 aaPredicted RBP1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 SMG7Q92540 1137 aaKnown RBP1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 LARP4BQ92615 738 aaKnown RBP1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 PRIMPOLQ96LW4 560 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 MKNK1Q9BUB5 465 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 MMRN2Q9H8L6 949 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 ZFYVE28Q9HCC9 887 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 SLC2A4RGQ9NR83 387 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 PPP4R2Q9NY27 417 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 FOXD3Q9UJU5 478 aaPredicted RBP1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 SAMM50Q9Y512 469 aa1.01□□□□□ -2.25
SNORD42B-201ENST00000458893 CYP1A1P04798 512 aaPredicted RBP1□□□□□ -2.25
SNORD42B-201ENST00000458893 ARNTP27540 789 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 NTF4P34130 210 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 CAP2P40123 477 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 PCBP3P57721 371 aaKnown RBP1□□□□□ -2.25
SNORD42B-201ENST00000458893 CHMP4BP1P59074 171 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 DGCR2P98153 550 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 PLCB2Q00722 1185 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 DLX2Q07687 328 aaPredicted RBP1□□□□□ -2.25
SNORD42B-201ENST00000458893 SMAD4Q13485 552 aaKnown RBP1□□□□□ -2.25
SNORD42B-201ENST00000458893 NOM1Q5C9Z4 860 aaKnown RBP1□□□□□ -2.25
SNORD42B-201ENST00000458893 PRAMEF13Q5VWM6 474 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 B3GNT8Q7Z7M8 397 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 IL27Q8NEV9 243 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 ALG3Q92685 438 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 EXTL1Q92935 676 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 PLCD4Q9BRC7 762 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 KRTAP4-3Q9BYR4 195 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 VRTNQ9H8Y1 702 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 UNKLQ9H9P5 680 aaKnown RBP1□□□□□ -2.25
SNORD42B-201ENST00000458893 TNFRSF10DQ9UBN6 386 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 PCDHA4Q9UN74 947 aa1□□□□□ -2.25
SNORD42B-201ENST00000458893 C9orf118A6NHY6 69 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 F8W031 263 aaPredicted RBP0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 U2SURPO15042 1029 aaKnown RBP0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 FOXN1O15353 648 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 PRMT3O60678 531 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 ZFPL1O95159 310 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 CST3P01034 146 aaPredicted RBP0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 NEFLP07196 543 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 ADRA1BP35368 520 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 MC3RP41968 323 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 EPHB4P54760 987 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 RING1Q06587 406 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 SLBPQ14493 270 aaKnown RBP eCLIP0.99□□□□□ -2.257e-9■□□□□ 9.4
SNORD42B-201ENST00000458893 HSF5Q4G112 596 aaPredicted RBP0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 KLHL22Q53GT1 634 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 LCE1AQ5T7P2 110 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 HDGFL1Q5TGJ6 251 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 KIAA0319Q5VV43 1072 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 LAIR1Q6GTX8 287 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 ALKBH2Q6NS38 261 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 PAQR3Q6TCH7 311 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 DTHD1Q6ZMT9 781 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 KRTAP5-2Q701N4 177 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 HDXQ7Z353 690 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 PDZD3Q86UT5 571 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 USP48Q86UV5 1035 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 GALNT12Q8IXK2 581 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 ULK2Q8IYT8 1036 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 C9orf106Q8NAJ2 232 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 ZBTB8BQ8NAP8 495 aaPredicted RBP0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 DTWD2Q8NBA8 298 aa0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 TXNDC5Q8NBS9 432 aaKnown RBP0.99□□□□□ -2.25
SNORD42B-201ENST00000458893 GIMAP8Q8ND71 665 aaPredicted RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms