RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 GMCL1Q96IK5 515 aa20.69■□□□□ 0.9
SCARNA2-201ENST00000458748 TRIOBPQ9H2D6 2365 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 GSPT1P15170 499 aaKnown RBP20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 SLC1A4P43007 532 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 FXR1P51114 621 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 HAND2P61296 217 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 CCDC178Q5BJE1 867 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 OLFML2BQ68BL8 750 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 CHRDL2Q6WN34 429 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 CENPQQ7L2Z9 268 aaPredicted RBP20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 REPS2Q8NFH8 660 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 NPLOC4Q8TAT6 608 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 CHURC1Q8WUH1 139 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 NUP88Q99567 741 aaPredicted RBP20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 TEX13BQ9BXU2 312 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 TCP11L1Q9NUJ3 509 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 OGDHLQ9ULD0 1010 aa20.68■□□□□ 0.9
SCARNA2-201ENST00000458748 IGHA2P01877 340 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 STAT2P52630 851 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 IKQ13123 557 aaPredicted RBP20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 KCTD2Q14681 263 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 NECAB2Q7Z6G3 386 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 FAM160B2Q86V87 743 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 KIFC2Q96AC6 838 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 INCENPQ9NQS7 918 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 FLRT1Q9NZU1 646 aa20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 ZNF214Q9UL59 606 aaPredicted RBP20.67■□□□□ 0.9
SCARNA2-201ENST00000458748 ATP2A1O14983 1001 aa20.66■□□□□ 0.9
SCARNA2-201ENST00000458748 DIS3LQ8TF46 1054 aaKnown RBP20.66■□□□□ 0.9
SCARNA2-201ENST00000458748 PAWRQ96IZ0 340 aaKnown RBP20.66■□□□□ 0.9
SCARNA2-201ENST00000458748 TTC14Q96N46 770 aa20.66■□□□□ 0.9
SCARNA2-201ENST00000458748 IL17RBQ9NRM6 502 aa20.66■□□□□ 0.9
SCARNA2-201ENST00000458748 MSCO60682 206 aa20.65■□□□□ 0.9
SCARNA2-201ENST00000458748 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
SCARNA2-201ENST00000458748 NOVP48745 357 aa20.65■□□□□ 0.9
SCARNA2-201ENST00000458748 OAZ1P54368 228 aa20.65■□□□□ 0.9
SCARNA2-201ENST00000458748 MMP19Q99542 508 aa20.65■□□□□ 0.9
SCARNA2-201ENST00000458748 NR2E3Q9Y5X4 410 aa20.65■□□□□ 0.9
SCARNA2-201ENST00000458748 TMEM232C9JQI7 657 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 NMT2O60551 498 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 PLA2G6O60733 806 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 COBLO75128 1261 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 MCCP23508 829 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 CCND3P30281 292 aaPredicted RBP20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 LHX8Q68G74 356 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 SNRNP48Q6IEG0 339 aaKnown RBP20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 RCSD1Q6JBY9 416 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 IQCA1Q86XH1 822 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 DCAF4Q8WV16 495 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 KRT23Q9C075 422 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 NBPF3Q9H094 633 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 CNNM2Q9H8M5 875 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 DIS3Q9Y2L1 958 aaKnown RBP20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 TACC3Q9Y6A5 838 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 PLXNA1Q9UIW2 1896 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 FRMPD3Q5JV73 1810 aa20.64■□□□□ 0.89
SCARNA2-201ENST00000458748 TBC1D10CQ8IV04 446 aa20.63■□□□□ 0.89
SCARNA2-201ENST00000458748 SLC38A10Q9HBR0 1119 aa20.63■□□□□ 0.89
SCARNA2-201ENST00000458748 RBM27Q9P2N5 1060 aaKnown RBP20.63■□□□□ 0.89
SCARNA2-201ENST00000458748 FBXO40Q9UH90 709 aa20.63■□□□□ 0.89
SCARNA2-201ENST00000458748 LAMA4Q16363 1823 aa20.62■□□□□ 0.89
SCARNA2-201ENST00000458748 EVI5O60447 810 aa20.62■□□□□ 0.89
SCARNA2-201ENST00000458748 NEFLP07196 543 aa20.62■□□□□ 0.89
SCARNA2-201ENST00000458748 CHMLP26374 656 aa20.62■□□□□ 0.89
SCARNA2-201ENST00000458748 CYP2C19P33261 490 aa20.62■□□□□ 0.89
SCARNA2-201ENST00000458748 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
SCARNA2-201ENST00000458748 CPXCR1Q8N123 301 aa20.62■□□□□ 0.89
SCARNA2-201ENST00000458748 CYBAP13498 195 aa20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 MNX1P50219 401 aaPredicted RBP20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 TRDNQ13061 729 aa20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 DGKHQ86XP1 1220 aa20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 MAML3Q96JK9 1138 aa20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 C11orf49Q9H6J7 331 aa20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 DDX20Q9UHI6 824 aaKnown RBP20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 NRBP1Q9UHY1 535 aa20.61■□□□□ 0.89
SCARNA2-201ENST00000458748 CNGA1P29973 690 aa20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 KCTD1Q719H9 257 aa20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 CHST13Q8NET6 341 aa20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 DDX11Q96FC9 970 aa20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 TMEM47Q9BQJ4 181 aa20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 MTMR7Q9Y216 660 aa20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 U3KPZ7 1027 aaPredicted RBP20.6■□□□□ 0.89
SCARNA2-201ENST00000458748 NEDD4P46934 1319 aa20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 KDM4AO75164 1064 aa20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 ZNF792Q3KQV3 632 aa20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 TKFCQ3LXA3 575 aa20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 KIAA1211Q6ZU35 1233 aa20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 RAVER2Q9HCJ3 691 aaKnown RBP20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 PNMA2Q9UL42 364 aa20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 ALPK3Q96L96 1907 aa20.59■□□□□ 0.89
SCARNA2-201ENST00000458748 ANKRD35Q8N283 1001 aa20.58■□□□□ 0.89
SCARNA2-201ENST00000458748 MSL3Q8N5Y2 521 aaKnown RBP20.58■□□□□ 0.89
SCARNA2-201ENST00000458748 TRPV1Q8NER1 839 aa20.58■□□□□ 0.89
SCARNA2-201ENST00000458748 CCDC136Q96JN2 1154 aa20.58■□□□□ 0.89
SCARNA2-201ENST00000458748 UBAC1Q9BSL1 405 aa20.58■□□□□ 0.89
SCARNA2-201ENST00000458748 PRO3102Q9H379 93 aa20.58■□□□□ 0.89
SCARNA2-201ENST00000458748 KAT14Q9H8E8 782 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms