RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 MMP19Q99542 508 aa21.99■■□□□ 1.11
USP39-209ENST00000458268 HOMER2Q9NSB8 354 aa21.99■■□□□ 1.11
USP39-209ENST00000458268 U3KPZ7 1027 aaPredicted RBP21.99■■□□□ 1.11
USP39-209ENST00000458268 SLC25A27O95847 323 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 FCER1AP12319 257 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 GRB14Q14449 540 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 CCDC174Q6PII3 467 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 RIOX2Q8IUF8 465 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 NPLOC4Q8TAT6 608 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 USP6NLQ92738 828 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 KRT23Q9C075 422 aa21.98■■□□□ 1.11
USP39-209ENST00000458268 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.98■■□□□ 1.11
USP39-209ENST00000458268 ZNF214Q9UL59 606 aaPredicted RBP21.98■■□□□ 1.11
USP39-209ENST00000458268 PLXNA1Q9UIW2 1896 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 TFRCP02786 760 aaKnown RBP21.97■■□□□ 1.11
USP39-209ENST00000458268 SLC16A2P36021 539 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 TRDNQ13061 729 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 KCTD2Q14681 263 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 BMP2KLQ5H9B9 411 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 RCSD1Q6JBY9 416 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 FAM160B2Q86V87 743 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 REPS2Q8NFH8 660 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 U2AF1L4Q8WU68 220 aaKnown RBP21.97■■□□□ 1.11
USP39-209ENST00000458268 CHURC1Q8WUH1 139 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 DCAF4Q8WV16 495 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 UBAC1Q9BSL1 405 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 TEX13BQ9BXU2 312 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 CNNM2Q9H8M5 875 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 HMX1Q9NP08 348 aaPredicted RBP21.97■■□□□ 1.11
USP39-209ENST00000458268 TCP11L1Q9NUJ3 509 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 FLRT1Q9NZU1 646 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 ADAMTS5Q9UNA0 930 aa21.97■■□□□ 1.11
USP39-209ENST00000458268 RBM8AQ9Y5S9 174 aaKnown RBP21.97■■□□□ 1.11
USP39-209ENST00000458268 PGK2P07205 417 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 GJB1P08034 283 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 XRCC5P13010 732 aaKnown RBP21.96■■□□□ 1.11
USP39-209ENST00000458268 MFSD14CQ5VZR4 134 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 TTBK2Q6IQ55 1244 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 RALYLQ86SE5 291 aaKnown RBP21.96■■□□□ 1.11
USP39-209ENST00000458268 TRMT44Q8IYL2 757 aaKnown RBP21.96■■□□□ 1.11
USP39-209ENST00000458268 ZSCAN10Q96SZ4 725 aaPredicted RBP21.96■■□□□ 1.11
USP39-209ENST00000458268 ESYT1Q9BSJ8 1104 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 KAT14Q9H8E8 782 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 ANO2Q9NQ90 1003 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 ZNF236Q9UL36 1845 aa21.96■■□□□ 1.11
USP39-209ENST00000458268 STRNO43815 780 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 CYP21A2P08686 494 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 CNGA1P29973 690 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 CYP2C19P33261 490 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 CACNB2Q08289 660 aaPredicted RBP21.95■■□□□ 1.1
USP39-209ENST00000458268 CASC1Q6TDU7 716 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 SHISA4Q96DD7 197 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 SLC5A4Q9NY91 659 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 ZSWIM5Q9P217 1185 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 RIPK3Q9Y572 518 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 TNKSO95271 1327 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 RPTORQ8N122 1335 aa21.95■■□□□ 1.1
USP39-209ENST00000458268 COBLO75128 1261 aa21.94■■□□□ 1.1
USP39-209ENST00000458268 CCND3P30281 292 aaPredicted RBP21.94■■□□□ 1.1
USP39-209ENST00000458268 SLC38A10Q9HBR0 1119 aa21.94■■□□□ 1.1
USP39-209ENST00000458268 PRR12Q9ULL5 1215 aa21.94■■□□□ 1.1
USP39-209ENST00000458268 TAF6LQ9Y6J9 622 aa21.94■■□□□ 1.1
USP39-209ENST00000458268 SGPL1O95470 568 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 GOLGA8HP0CJ92 632 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 TAL1P17542 331 aaPredicted RBP21.93■■□□□ 1.1
USP39-209ENST00000458268 COPB2P35606 906 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 GJA8P48165 433 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 CCDC178Q5BJE1 867 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 CYB5R4Q7L1T6 521 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 PNMA1Q8ND90 353 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 DDX11Q96FC9 970 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 AGBL1Q96MI9 1066 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 TTC14Q96N46 770 aa21.93■■□□□ 1.1
USP39-209ENST00000458268 E7EWF7 191 aa21.92■■□□□ 1.1
USP39-209ENST00000458268 CDC45O75419 566 aa21.92■■□□□ 1.1
USP39-209ENST00000458268 PDHBP11177 359 aa21.92■■□□□ 1.1
USP39-209ENST00000458268 ALAS1P13196 640 aa21.92■■□□□ 1.1
USP39-209ENST00000458268 SYDE2Q5VT97 1194 aa21.92■■□□□ 1.1
USP39-209ENST00000458268 CHST3Q7LGC8 479 aa21.92■■□□□ 1.1
USP39-209ENST00000458268 ENAHQ8N8S7 591 aaPredicted RBP21.92■■□□□ 1.1
USP39-209ENST00000458268 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
USP39-209ENST00000458268 FARP2O94887 1054 aaPredicted RBP21.91■■□□□ 1.1
USP39-209ENST00000458268 NOVP48745 357 aa21.91■■□□□ 1.1
USP39-209ENST00000458268 IFIT1BQ5T764 474 aaKnown RBP21.91■■□□□ 1.1
USP39-209ENST00000458268 DGKHQ86XP1 1220 aa21.91■■□□□ 1.1
USP39-209ENST00000458268 ANKRD35Q8N283 1001 aa21.91■■□□□ 1.1
USP39-209ENST00000458268 MAP4K1Q92918 833 aa21.91■■□□□ 1.1
USP39-209ENST00000458268 LSG1Q9H089 658 aaKnown RBP21.91■■□□□ 1.1
USP39-209ENST00000458268 CPVLQ9H3G5 476 aa21.91■■□□□ 1.1
USP39-209ENST00000458268 PAK6Q9NQU5 681 aaPredicted RBP21.91■■□□□ 1.1
USP39-209ENST00000458268 IFIT3O14879 490 aaKnown RBP21.9■■□□□ 1.1
USP39-209ENST00000458268 DHX16O60231 1041 aaKnown RBP21.9■■□□□ 1.1
USP39-209ENST00000458268 HOXC6P09630 235 aa21.9■■□□□ 1.1
USP39-209ENST00000458268 ZNF543Q08ER8 600 aa21.9■■□□□ 1.1
USP39-209ENST00000458268 STOX1Q6ZVD7 989 aa21.9■■□□□ 1.1
USP39-209ENST00000458268 ABRAQ8N0Z2 381 aa21.9■■□□□ 1.1
USP39-209ENST00000458268 NCOA7Q8NI08 942 aa21.9■■□□□ 1.1
USP39-209ENST00000458268 RNF146Q9NTX7 359 aa21.9■■□□□ 1.1
USP39-209ENST00000458268 CCPG1Q9ULG6 757 aa21.9■■□□□ 1.1
USP39-209ENST00000458268 ERICH2A1L162 156 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms