RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TMEM132BQ14DG7 1078 aa18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 IFNL3Q8IZI9 196 aa18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 ISY1Q9ULR0 285 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 ZNFX1Q9P2E3 1918 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-204ENST00000457942 MUC3AQ02505 3323 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 ITGB8P26012 769 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 EPHB4P54760 987 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 PDE4BQ07343 736 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 OLFML2BQ68BL8 750 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 MMP19Q99542 508 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 NYAP2Q9P242 653 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 CTDP1Q9Y5B0 961 aaPredicted RBP18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 TTC28Q96AY4 2481 aa18.75■□□□□ 0.59
CHCHD3-204ENST00000457942 PLXNA1Q9UIW2 1896 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 SEPT4O43236 478 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 COBLO75128 1261 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 TSPY3P0CV98 308 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 TSPY8P0CW00 308 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 TLE2Q04725 743 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 KCTD2Q14681 263 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 LRRC41Q15345 812 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 ZMYM1Q5SVZ6 1142 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 ABRAQ8N0Z2 381 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 SLF1Q9BQI6 1058 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 CLIP2Q9UDT6 1046 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 RAPGEFL1Q9UHV5 662 aa18.74■□□□□ 0.59
CHCHD3-204ENST00000457942 F5H6K3 240 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 VWA5AO00534 786 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 PQBP1O60828 265 aaKnown RBP18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 NDUFB10O96000 172 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 STAT3P40763 770 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 SLC4A3P48751 1232 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 KLRC3Q07444 240 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 RIOX2Q8IUF8 465 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 LRRC47Q8N1G4 583 aaKnown RBP18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 PPM1EQ8WY54 764 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 LENG1Q96BZ8 264 aaPredicted RBP18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
CHCHD3-204ENST00000457942 COPB2P35606 906 aa18.72■□□□□ 0.59
CHCHD3-204ENST00000457942 PPARAQ07869 468 aa18.72■□□□□ 0.59
CHCHD3-204ENST00000457942 GRIN2CQ14957 1233 aa18.72■□□□□ 0.59
CHCHD3-204ENST00000457942 SNX17Q15036 470 aa18.72■□□□□ 0.59
CHCHD3-204ENST00000457942 CCDC129Q6ZRS4 1044 aa18.72■□□□□ 0.59
CHCHD3-204ENST00000457942 TTLL1O95922 423 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 IGHA2P01877 340 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 PGK2P07205 417 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 CLTBP09497 229 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 COL9A1P20849 921 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 HDAC1Q13547 482 aaPredicted RBP18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 SNRNP48Q6IEG0 339 aaKnown RBP18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 KIFC2Q96AC6 838 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 MAML3Q96JK9 1138 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 XPNPEP3Q9NQH7 507 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 ADAMTS5Q9UNA0 930 aa18.71■□□□□ 0.59
CHCHD3-204ENST00000457942 IGKV6D-41A0A0C4DH26 115 aa18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 PGK1P00558 417 aa18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 RAG1P15918 1043 aa18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 DNAJB2P25686 324 aa18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 SYMPKQ92797 1274 aaKnown RBP18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 TEX13BQ9BXU2 312 aa18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 MTMR4Q9NYA4 1195 aa18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 ZNF214Q9UL59 606 aaPredicted RBP18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
CHCHD3-204ENST00000457942 ZBED4O75132 1171 aa18.69■□□□□ 0.58
CHCHD3-204ENST00000457942 PDE1AP54750 535 aa18.69■□□□□ 0.58
CHCHD3-204ENST00000457942 TFAP4Q01664 338 aa18.69■□□□□ 0.58
CHCHD3-204ENST00000457942 TJAP1Q5JTD0 557 aa18.69■□□□□ 0.58
CHCHD3-204ENST00000457942 CPXCR1Q8N123 301 aa18.69■□□□□ 0.58
CHCHD3-204ENST00000457942 PRPF38AQ8NAV1 312 aaKnown RBP18.69■□□□□ 0.58
CHCHD3-204ENST00000457942 REPS2Q8NFH8 660 aa18.69■□□□□ 0.58
CHCHD3-204ENST00000457942 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 TSPY2A6NKD2 308 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 FPGSQ05932 587 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 CTDSPL2Q05D32 466 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 IKQ13123 557 aaPredicted RBP18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 SLFN13Q68D06 897 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 NEDD1Q8NHV4 660 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 LNPKQ9C0E8 428 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 FEM1BQ9UK73 627 aa18.68■□□□□ 0.58
CHCHD3-204ENST00000457942 A0A1W2PQ45 241 aaPredicted RBP18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 A0A1W2PQY0 241 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 TNFRSF10AO00220 468 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 RARBP10826 455 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 BMP3P12645 472 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 TAL1P17542 331 aaPredicted RBP18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 PPP4R3BQ5MIZ7 849 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 GMCL1P1Q8NEA9 526 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 DDX11Q96FC9 970 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 TOMM22Q9NS69 142 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 TMEM39AQ9NV64 488 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 SYNPO2Q9UMS6 1093 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 STX8Q9UNK0 236 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms