RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PDE4DIPQ5VU43 2346 aa27.26■■□□□ 1.95
CBX3-204ENST00000456948 PLA2G6O60733 806 aa27.26■■□□□ 1.95
CBX3-204ENST00000456948 DGKHQ86XP1 1220 aa27.26■■□□□ 1.95
CBX3-204ENST00000456948 TMEM47Q9BQJ4 181 aa27.26■■□□□ 1.95
CBX3-204ENST00000456948 NEDD4P46934 1319 aa27.25■■□□□ 1.95
CBX3-204ENST00000456948 KDM4AO75164 1064 aa27.25■■□□□ 1.95
CBX3-204ENST00000456948 OAZ1P54368 228 aa27.25■■□□□ 1.95
CBX3-204ENST00000456948 CCDC96Q2M329 555 aa27.25■■□□□ 1.95
CBX3-204ENST00000456948 MFSD14CQ5VZR4 134 aa27.25■■□□□ 1.95
CBX3-204ENST00000456948 UBAC1Q9BSL1 405 aa27.25■■□□□ 1.95
CBX3-204ENST00000456948 HMX1Q9NP08 348 aaPredicted RBP27.25■■□□□ 1.95
CBX3-204ENST00000456948 MTMR7Q9Y216 660 aa27.25■■□□□ 1.95
CBX3-204ENST00000456948 RPTORQ8N122 1335 aa27.24■■□□□ 1.95
CBX3-204ENST00000456948 B4E1Z4 1266 aa27.24■■□□□ 1.95
CBX3-204ENST00000456948 ATP2A1O14983 1001 aa27.24■■□□□ 1.95
CBX3-204ENST00000456948 HOXC6P09630 235 aa27.24■■□□□ 1.95
CBX3-204ENST00000456948 KCTD2Q14681 263 aa27.24■■□□□ 1.95
CBX3-204ENST00000456948 UNC93B1Q9H1C4 597 aa27.24■■□□□ 1.95
CBX3-204ENST00000456948 IL25Q9H293 177 aa27.24■■□□□ 1.95
CBX3-204ENST00000456948 LAMA4Q16363 1823 aa27.23■■□□□ 1.95
CBX3-204ENST00000456948 ADORA2AP29274 412 aa27.23■■□□□ 1.95
CBX3-204ENST00000456948 SNRNP48Q6IEG0 339 aaKnown RBP27.23■■□□□ 1.95
CBX3-204ENST00000456948 CPXCR1Q8N123 301 aa27.23■■□□□ 1.95
CBX3-204ENST00000456948 MMP19Q99542 508 aa27.23■■□□□ 1.95
CBX3-204ENST00000456948 SLC38A10Q9HBR0 1119 aa27.23■■□□□ 1.95
CBX3-204ENST00000456948 ZNF214Q9UL59 606 aaPredicted RBP27.23■■□□□ 1.95
CBX3-204ENST00000456948 A0A0G2JMZ2 1700 aa27.23■■□□□ 1.95
CBX3-204ENST00000456948 PARP14Q460N5 1801 aa27.23■■□□□ 1.95
CBX3-204ENST00000456948 GJA8P48165 433 aa27.22■■□□□ 1.95
CBX3-204ENST00000456948 PTH1RQ03431 593 aa27.22■■□□□ 1.95
CBX3-204ENST00000456948 KCTD1Q719H9 257 aa27.22■■□□□ 1.95
CBX3-204ENST00000456948 RALYLQ86SE5 291 aaKnown RBP27.22■■□□□ 1.95
CBX3-204ENST00000456948 TRIB2Q92519 343 aa27.22■■□□□ 1.95
CBX3-204ENST00000456948 MAP4K1Q92918 833 aa27.22■■□□□ 1.95
CBX3-204ENST00000456948 ZSCAN10Q96SZ4 725 aaPredicted RBP27.22■■□□□ 1.95
CBX3-204ENST00000456948 ZSWIM5Q9P217 1185 aa27.22■■□□□ 1.95
CBX3-204ENST00000456948 BRCA2P51587 3418 aa27.21■■□□□ 1.95
CBX3-204ENST00000456948 REPS2Q8NFH8 660 aa27.21■■□□□ 1.95
CBX3-204ENST00000456948 ZKSCAN3Q9BRR0 538 aa27.21■■□□□ 1.95
CBX3-204ENST00000456948 KAT14Q9H8E8 782 aa27.21■■□□□ 1.95
CBX3-204ENST00000456948 PPP4R2Q9NY27 417 aa27.21■■□□□ 1.95
CBX3-204ENST00000456948 FBXO40Q9UH90 709 aa27.21■■□□□ 1.95
CBX3-204ENST00000456948 SGPL1O95470 568 aa27.2■■□□□ 1.94
CBX3-204ENST00000456948 TFRCP02786 760 aaKnown RBP27.2■■□□□ 1.94
CBX3-204ENST00000456948 PRKAR2AP13861 404 aaKnown RBP27.2■■□□□ 1.94
CBX3-204ENST00000456948 SLC4A3P48751 1232 aa27.2■■□□□ 1.94
CBX3-204ENST00000456948 CHMP4CQ96CF2 233 aa27.2■■□□□ 1.94
CBX3-204ENST00000456948 ESYT1Q9BSJ8 1104 aa27.2■■□□□ 1.94
CBX3-204ENST00000456948 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.2■■□□□ 1.943e-6■■□□□ 14.4
CBX3-204ENST00000456948 PLXNB2O15031 1838 aa27.2■■□□□ 1.94
CBX3-204ENST00000456948 COL11A1P12107 1806 aaPredicted RBP27.19■■□□□ 1.94
CBX3-204ENST00000456948 ERICH2A1L162 156 aa27.19■■□□□ 1.94
CBX3-204ENST00000456948 SART3Q15020 963 aaKnown RBP27.19■■□□□ 1.94
CBX3-204ENST00000456948 NCOA7Q8NI08 942 aa27.19■■□□□ 1.94
CBX3-204ENST00000456948 U2AF1L4Q8WU68 220 aaKnown RBP27.19■■□□□ 1.94
CBX3-204ENST00000456948 ANKS1AQ92625 1134 aa27.19■■□□□ 1.94
CBX3-204ENST00000456948 DEFB118Q96PH6 123 aa27.19■■□□□ 1.94
CBX3-204ENST00000456948 PAK6Q9NQU5 681 aaPredicted RBP27.19■■□□□ 1.94
CBX3-204ENST00000456948 PNMA2Q9UL42 364 aa27.19■■□□□ 1.94
CBX3-204ENST00000456948 CDC45O75419 566 aa27.18■■□□□ 1.94
CBX3-204ENST00000456948 CYP21A2P08686 494 aa27.18■■□□□ 1.94
CBX3-204ENST00000456948 GPATCH4Q5T3I0 446 aaKnown RBP27.18■■□□□ 1.94
CBX3-204ENST00000456948 PRPF38BQ5VTL8 546 aaKnown RBP27.18■■□□□ 1.94
CBX3-204ENST00000456948 CHST13Q8NET6 341 aa27.18■■□□□ 1.94
CBX3-204ENST00000456948 DDX11Q96FC9 970 aa27.18■■□□□ 1.94
CBX3-204ENST00000456948 RAVER2Q9HCJ3 691 aaKnown RBP27.18■■□□□ 1.94
CBX3-204ENST00000456948 MKI67P46013 3256 aaKnown RBP27.17■■□□□ 1.94
CBX3-204ENST00000456948 CCL14Q16627 93 aa27.17■■□□□ 1.94
CBX3-204ENST00000456948 TKFCQ3LXA3 575 aa27.17■■□□□ 1.94
CBX3-204ENST00000456948 OLFML2BQ68BL8 750 aa27.17■■□□□ 1.94
CBX3-204ENST00000456948 PNMA1Q8ND90 353 aa27.17■■□□□ 1.94
CBX3-204ENST00000456948 ANO2Q9NQ90 1003 aa27.17■■□□□ 1.94
CBX3-204ENST00000456948 PRR12Q9ULL5 1215 aa27.17■■□□□ 1.94
CBX3-204ENST00000456948 RBM8AQ9Y5S9 174 aaKnown RBP27.17■■□□□ 1.94
CBX3-204ENST00000456948 PDHBP11177 359 aa27.16■■□□□ 1.94
CBX3-204ENST00000456948 IFIT1BQ5T764 474 aaKnown RBP27.16■■□□□ 1.94
CBX3-204ENST00000456948 MAP3K21Q5TCX8 1036 aa27.16■■□□□ 1.94
CBX3-204ENST00000456948 DIS3Q9Y2L1 958 aaKnown RBP27.16■■□□□ 1.94
CBX3-204ENST00000456948 TNKSO95271 1327 aa27.16■■□□□ 1.94
CBX3-204ENST00000456948 CACNB2Q08289 660 aaPredicted RBP27.15■■□□□ 1.94
CBX3-204ENST00000456948 SYDE2Q5VT97 1194 aa27.15■■□□□ 1.94
CBX3-204ENST00000456948 RNF20Q5VTR2 975 aa27.15■■□□□ 1.94
CBX3-204ENST00000456948 BTNL9Q6UXG8 535 aa27.15■■□□□ 1.94
CBX3-204ENST00000456948 SKAP1Q86WV1 359 aa27.15■■□□□ 1.94
CBX3-204ENST00000456948 NPLOC4Q8TAT6 608 aa27.15■■□□□ 1.94
CBX3-204ENST00000456948 GPCPD1Q9NPB8 672 aa27.15■■□□□ 1.94
CBX3-204ENST00000456948 E7EWF7 191 aa27.14■■□□□ 1.94
CBX3-204ENST00000456948 COBLO75128 1261 aa27.14■■□□□ 1.94
CBX3-204ENST00000456948 ZNF543Q08ER8 600 aa27.14■■□□□ 1.94
CBX3-204ENST00000456948 TRIM32Q13049 653 aa27.14■■□□□ 1.94
CBX3-204ENST00000456948 ANKRD35Q8N283 1001 aa27.14■■□□□ 1.94
CBX3-204ENST00000456948 ENAHQ8N8S7 591 aaPredicted RBP27.14■■□□□ 1.94
CBX3-204ENST00000456948 ZNF236Q9UL36 1845 aa27.13■■□□□ 1.93
CBX3-204ENST00000456948 LSG1Q9H089 658 aaKnown RBP27.13■■□□□ 1.93
CBX3-204ENST00000456948 ACAD9Q9H845 621 aa27.13■■□□□ 1.93
CBX3-204ENST00000456948 RIPK3Q9Y572 518 aa27.13■■□□□ 1.93
CBX3-204ENST00000456948 ZNFX1Q9P2E3 1918 aaKnown RBP27.13■■□□□ 1.93
CBX3-204ENST00000456948 FRMPD2Q68DX3 1309 aaPredicted RBP27.13■■□□□ 1.93
CBX3-204ENST00000456948 MSCO60682 206 aa27.12■■□□□ 1.93
CBX3-204ENST00000456948 SNHG28P0DPA3 235 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms