RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 COBLO75128 1261 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 CYP2C19P33261 490 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 STAT2P52630 851 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 LHX8Q68G74 356 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 SNRNP48Q6IEG0 339 aaKnown RBP21.13■□□□□ 0.97
MSH6-207ENST00000456246 FAM160B2Q86V87 743 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 DIS3LQ8TF46 1054 aaKnown RBP21.13■□□□□ 0.97
MSH6-207ENST00000456246 CHURC1Q8WUH1 139 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 KIFC2Q96AC6 838 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 RNF41Q9H4P4 317 aaPredicted RBP21.13■□□□□ 0.97
MSH6-207ENST00000456246 C11orf49Q9H6J7 331 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 SLC38A10Q9HBR0 1119 aa21.13■□□□□ 0.97
MSH6-207ENST00000456246 DDX20Q9UHI6 824 aaKnown RBP21.13■□□□□ 0.97
MSH6-207ENST00000456246 PLA2G6O60733 806 aa21.12■□□□□ 0.97
MSH6-207ENST00000456246 CYBAP13498 195 aa21.12■□□□□ 0.97
MSH6-207ENST00000456246 SLC1A4P43007 532 aa21.12■□□□□ 0.97
MSH6-207ENST00000456246 NOVP48745 357 aa21.12■□□□□ 0.97
MSH6-207ENST00000456246 MAML3Q96JK9 1138 aa21.12■□□□□ 0.97
MSH6-207ENST00000456246 TOMM22Q9NS69 142 aa21.12■□□□□ 0.97
MSH6-207ENST00000456246 NRBP1Q9UHY1 535 aa21.12■□□□□ 0.97
MSH6-207ENST00000456246 FRMPD3Q5JV73 1810 aa21.11■□□□□ 0.97
MSH6-207ENST00000456246 SLC34A2O95436 690 aa21.11■□□□□ 0.97
MSH6-207ENST00000456246 CNGA1P29973 690 aa21.11■□□□□ 0.97
MSH6-207ENST00000456246 MNX1P50219 401 aaPredicted RBP21.11■□□□□ 0.97
MSH6-207ENST00000456246 CWC27Q6UX04 472 aaKnown RBP21.11■□□□□ 0.97
MSH6-207ENST00000456246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.11■□□□□ 0.972e-7■■■■□ 25.1
MSH6-207ENST00000456246 IL17RBQ9NRM6 502 aa21.11■□□□□ 0.97
MSH6-207ENST00000456246 TCP11L1Q9NUJ3 509 aa21.11■□□□□ 0.97
MSH6-207ENST00000456246 FBXO40Q9UH90 709 aa21.11■□□□□ 0.97
MSH6-207ENST00000456246 ISY1Q9ULR0 285 aaKnown RBP21.11■□□□□ 0.97
MSH6-207ENST00000456246 ZNFX1Q9P2E3 1918 aaKnown RBP21.11■□□□□ 0.97
MSH6-207ENST00000456246 AKNAD1Q5T1N1 836 aa21.1■□□□□ 0.97
MSH6-207ENST00000456246 MFSD6Q6ZSS7 791 aa21.1■□□□□ 0.97
MSH6-207ENST00000456246 STAG1Q8WVM7 1258 aa21.1■□□□□ 0.97
MSH6-207ENST00000456246 TMEM232C9JQI7 657 aa21.09■□□□□ 0.97
MSH6-207ENST00000456246 SEPT4O43236 478 aa21.09■□□□□ 0.97
MSH6-207ENST00000456246 IKQ13123 557 aaPredicted RBP21.09■□□□□ 0.97
MSH6-207ENST00000456246 ZNF792Q3KQV3 632 aa21.09■□□□□ 0.97
MSH6-207ENST00000456246 RRP12Q5JTH9 1297 aaKnown RBP21.09■□□□□ 0.97
MSH6-207ENST00000456246 HABP4Q5JVS0 413 aaKnown RBP21.09■□□□□ 0.97
MSH6-207ENST00000456246 CPXCR1Q8N123 301 aa21.09■□□□□ 0.97
MSH6-207ENST00000456246 MSL3Q8N5Y2 521 aaKnown RBP21.09■□□□□ 0.97
MSH6-207ENST00000456246 CHST13Q8NET6 341 aa21.09■□□□□ 0.97
MSH6-207ENST00000456246 INCENPQ9NQS7 918 aa21.09■□□□□ 0.97
MSH6-207ENST00000456246 ZNF213O14771 459 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 NMT2O60551 498 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 TOP1P11387 765 aaKnown RBP21.08■□□□□ 0.97
MSH6-207ENST00000456246 COL6A1P12109 1028 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 MCCP23508 829 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 HAND2P61296 217 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 RCSD1Q6JBY9 416 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 DCAF4Q8WV16 495 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 DDX11Q96FC9 970 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 TTC14Q96N46 770 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 PLXNA1Q9UIW2 1896 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 TACC3Q9Y6A5 838 aa21.08■□□□□ 0.97
MSH6-207ENST00000456246 LAMA4Q16363 1823 aa21.08■□□□□ 0.96
MSH6-207ENST00000456246 TTC22Q5TAA0 569 aa21.07■□□□□ 0.96
MSH6-207ENST00000456246 TRPV1Q8NER1 839 aa21.07■□□□□ 0.96
MSH6-207ENST00000456246 ESR2Q92731 530 aa21.07■□□□□ 0.96
MSH6-207ENST00000456246 TINF2Q9BSI4 451 aa21.07■□□□□ 0.96
MSH6-207ENST00000456246 RAVER2Q9HCJ3 691 aaKnown RBP21.07■□□□□ 0.96
MSH6-207ENST00000456246 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
MSH6-207ENST00000456246 PFASO15067 1338 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 RAD50Q92878 1312 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 ALPK3Q96L96 1907 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 DNM1LO00429 736 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 PGK2P07205 417 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 IRX6P78412 446 aaPredicted RBP21.06■□□□□ 0.96
MSH6-207ENST00000456246 TKFCQ3LXA3 575 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 ZNF467Q7Z7K2 595 aaPredicted RBP21.06■□□□□ 0.96
MSH6-207ENST00000456246 ARRDC4Q8NCT1 418 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 RIPK3Q9Y572 518 aa21.06■□□□□ 0.96
MSH6-207ENST00000456246 DNAJC25-GNG10A0A024R161 153 aa21.05■□□□□ 0.96
MSH6-207ENST00000456246 PDE4AP27815 886 aa21.05■□□□□ 0.96
MSH6-207ENST00000456246 CCDC178Q5BJE1 867 aa21.05■□□□□ 0.96
MSH6-207ENST00000456246 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
MSH6-207ENST00000456246 ANKRD35Q8N283 1001 aa21.05■□□□□ 0.96
MSH6-207ENST00000456246 COLQQ9Y215 455 aaPredicted RBP21.05■□□□□ 0.96
MSH6-207ENST00000456246 SYNGAP1Q96PV0 1343 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 SLC4A3P48751 1232 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 IMMTQ16891 758 aaKnown RBP21.04■□□□□ 0.96
MSH6-207ENST00000456246 CCDC96Q2M329 555 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 CHRDL2Q6WN34 429 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 KCTD1Q719H9 257 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 TMEM47Q9BQJ4 181 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 ACAD9Q9H845 621 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 CNPY2Q9Y2B0 182 aa21.04■□□□□ 0.96
MSH6-207ENST00000456246 GSPT1P15170 499 aaKnown RBP21.03■□□□□ 0.96
MSH6-207ENST00000456246 MAMDC4Q6UXC1 1216 aa21.03■□□□□ 0.96
MSH6-207ENST00000456246 IQCA1Q86XH1 822 aa21.03■□□□□ 0.96
MSH6-207ENST00000456246 C7orf61Q8IZ16 206 aa21.03■□□□□ 0.96
MSH6-207ENST00000456246 PNMA2Q9UL42 364 aa21.03■□□□□ 0.96
MSH6-207ENST00000456246 PRR12Q9ULL5 1215 aa21.03■□□□□ 0.96
MSH6-207ENST00000456246 TRIOBPQ9H2D6 2365 aa21.03■□□□□ 0.96
MSH6-207ENST00000456246 KBTBD13C9JR72 458 aa21.02■□□□□ 0.96
MSH6-207ENST00000456246 BTNL9Q6UXG8 535 aa21.02■□□□□ 0.96
MSH6-207ENST00000456246 DGKHQ86XP1 1220 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms