RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 RNF20Q5VTR2 975 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 FBXO46Q6PJ61 603 aaPredicted RBP16.49■□□□□ 0.23
LINC01563-201ENST00000456235 GPR142Q7Z601 462 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
LINC01563-201ENST00000456235 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 PLXNA1Q9UIW2 1896 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 FEM1BQ9UK73 627 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 RIPK3Q9Y572 518 aa16.49■□□□□ 0.23
LINC01563-201ENST00000456235 CYP2B6P20813 491 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 HSPA4P34932 840 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 SNRNP48Q6IEG0 339 aaKnown RBP16.48■□□□□ 0.23
LINC01563-201ENST00000456235 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 RAET1EQ8TD07 263 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 GTF3C2Q8WUA4 911 aaPredicted RBP16.48■□□□□ 0.23
LINC01563-201ENST00000456235 COA7Q96BR5 231 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 LY9Q9HBG7 655 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 PRR12Q9ULL5 1215 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
LINC01563-201ENST00000456235 CTDP1Q9Y5B0 961 aaPredicted RBP16.48■□□□□ 0.23
LINC01563-201ENST00000456235 ZNFX1Q9P2E3 1918 aaKnown RBP16.48■□□□□ 0.23
LINC01563-201ENST00000456235 ERICH2A1L162 156 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 CCDC85CA6NKD9 419 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 SH2B2O14492 632 aaPredicted RBP16.47■□□□□ 0.23
LINC01563-201ENST00000456235 MCM5P33992 734 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 PRPF38AQ8NAV1 312 aaKnown RBP16.47■□□□□ 0.23
LINC01563-201ENST00000456235 NUP133Q8WUM0 1156 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 AGBL1Q96MI9 1066 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 TTC14Q96N46 770 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 NEK1Q96PY6 1258 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 USP26Q9BXU7 913 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 ZNF214Q9UL59 606 aaPredicted RBP16.47■□□□□ 0.23
LINC01563-201ENST00000456235 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
LINC01563-201ENST00000456235 ZBED4O75132 1171 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
LINC01563-201ENST00000456235 MAPK4P31152 587 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 SOX10P56693 466 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 TRIM32Q13049 653 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 CCL14Q16627 93 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 SYDE2Q5VT97 1194 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 NFXL1Q6ZNB6 911 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 ANKS1AQ92625 1134 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 SLC38A10Q9HBR0 1119 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 LCTP09848 1927 aa16.46■□□□□ 0.23
LINC01563-201ENST00000456235 RBBP6Q7Z6E9 1792 aaKnown RBP16.46■□□□□ 0.22
LINC01563-201ENST00000456235 ZNF536O15090 1300 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
LINC01563-201ENST00000456235 PGK2P07205 417 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
LINC01563-201ENST00000456235 STAT3P40763 770 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 CCNA1P78396 465 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 SART3Q15020 963 aaKnown RBP16.45■□□□□ 0.22
LINC01563-201ENST00000456235 C8orf34Q49A92 452 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 CCDC178Q5BJE1 867 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 MB21D1Q8N884 522 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
LINC01563-201ENST00000456235 ADCY3O60266 1144 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
LINC01563-201ENST00000456235 HOXD10P28358 340 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 ARHGEF6Q15052 776 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 MORN1Q5T089 497 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 ZNF654Q8IZM8 581 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
LINC01563-201ENST00000456235 CHURC1Q8WUH1 139 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
LINC01563-201ENST00000456235 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
LINC01563-201ENST00000456235 BRCA2P51587 3418 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 CCDC69A6NI79 296 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 ALAS1P13196 640 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 PTPREP23469 700 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 ADORA2AP29274 412 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 GRM4Q14833 912 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 MTFR1Q15390 333 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 PKN2Q16513 984 aaKnown RBP16.43■□□□□ 0.22
LINC01563-201ENST00000456235 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 USH1GQ495M9 461 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 NPLOC4Q8TAT6 608 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 TRIB2Q92519 343 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 KCNB2Q92953 911 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 MMP19Q99542 508 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 LARP6Q9BRS8 491 aaKnown RBP16.43■□□□□ 0.22
LINC01563-201ENST00000456235 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 UPF3BQ9BZI7 483 aaKnown RBP16.43■□□□□ 0.22
LINC01563-201ENST00000456235 FLRT1Q9NZU1 646 aa16.43■□□□□ 0.22
LINC01563-201ENST00000456235 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
LINC01563-201ENST00000456235 IVNS1ABPQ9Y6Y0 642 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms