RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
PDGFB-204ENST00000455790 PRPF38AQ8NAV1 312 aaKnown RBP14.18□□□□□ -0.14
PDGFB-204ENST00000455790 RWDD1Q9H446 243 aaPredicted RBP14.18□□□□□ -0.14
PDGFB-204ENST00000455790 RAVER2Q9HCJ3 691 aaKnown RBP14.18□□□□□ -0.14
PDGFB-204ENST00000455790 IL17RBQ9NRM6 502 aa14.18□□□□□ -0.14
PDGFB-204ENST00000455790 HELLSQ9NRZ9 838 aa14.18□□□□□ -0.14
PDGFB-204ENST00000455790 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
PDGFB-204ENST00000455790 TSPY2A6NKD2 308 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 SEPT4O43236 478 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-204ENST00000455790 SLC4A3P48751 1232 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 NUCB1Q02818 461 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 AAMPQ13685 434 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 GJC2Q5T442 439 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-204ENST00000455790 CHD1LQ86WJ1 897 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 PLEKHM2Q8IWE5 1019 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 LENG1Q96BZ8 264 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-204ENST00000455790 GDF15Q99988 308 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-204ENST00000455790 SLC38A10Q9HBR0 1119 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 SLC5A4Q9NY91 659 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 ANAPC4Q9UJX5 808 aa14.17□□□□□ -0.14
PDGFB-204ENST00000455790 DNM1LO00429 736 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 ATP2A1O14983 1001 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 FGAP02671 866 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 BMP3P12645 472 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 COPB2P35606 906 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
PDGFB-204ENST00000455790 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
PDGFB-204ENST00000455790 ALX1Q15699 326 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 RILPL2Q969X0 211 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 FEM1BQ9UK73 627 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
PDGFB-204ENST00000455790 STX8Q9UNK0 236 aa14.16□□□□□ -0.14
PDGFB-204ENST00000455790 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 PLXNA1Q9UIW2 1896 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 DNAJC25-GNG10A0A024R161 153 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 TMEM232C9JQI7 657 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 SOX1O00570 391 aaPredicted RBP14.15□□□□□ -0.14
PDGFB-204ENST00000455790 ORC4O43929 436 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 RANBP6O60518 1105 aaKnown RBP14.15□□□□□ -0.14
PDGFB-204ENST00000455790 ZBED4O75132 1171 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
PDGFB-204ENST00000455790 HSPD1P10809 573 aaKnown RBP14.15□□□□□ -0.14
PDGFB-204ENST00000455790 MCCP23508 829 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 HAND2P61296 217 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 GMCL1Q96IK5 515 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 FGD4Q96M96 766 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 TINF2Q9BSI4 451 aa14.15□□□□□ -0.14
PDGFB-204ENST00000455790 ZNFX1Q9P2E3 1918 aaKnown RBP14.15□□□□□ -0.14
PDGFB-204ENST00000455790 LAMA2P24043 3122 aaKnown RBP14.14□□□□□ -0.15
PDGFB-204ENST00000455790 FGRP09769 529 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 SLC1A4P43007 532 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 NOVP48745 357 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 SNAP25P60880 206 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
PDGFB-204ENST00000455790 TBC1D10CQ8IV04 446 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 DIS3Q9Y2L1 958 aaKnown RBP14.14□□□□□ -0.15
PDGFB-204ENST00000455790 CTDP1Q9Y5B0 961 aaPredicted RBP14.14□□□□□ -0.15
PDGFB-204ENST00000455790 SUPT16HQ9Y5B9 1047 aaKnown RBP14.14□□□□□ -0.15
PDGFB-204ENST00000455790 ZNF536O15090 1300 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 ZMYM6O95789 1325 aa14.14□□□□□ -0.15
PDGFB-204ENST00000455790 ZNF865P0CJ78 1059 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-204ENST00000455790 SDSP20132 328 aa14.13□□□□□ -0.15
PDGFB-204ENST00000455790 STAT2P52630 851 aa14.13□□□□□ -0.15
PDGFB-204ENST00000455790 IKQ13123 557 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-204ENST00000455790 LRRC41Q15345 812 aa14.13□□□□□ -0.15
PDGFB-204ENST00000455790 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDGFB-204ENST00000455790 AGBL1Q96MI9 1066 aa14.13□□□□□ -0.15
PDGFB-204ENST00000455790 OSBPL3Q9H4L5 887 aa14.13□□□□□ -0.15
PDGFB-204ENST00000455790 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
PDGFB-204ENST00000455790 NRBP1Q9UHY1 535 aa14.13□□□□□ -0.15
PDGFB-204ENST00000455790 A0A1W2PPC1 479 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 KBTBD13C9JR72 458 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 SNAI1O95863 264 aaPredicted RBP14.12□□□□□ -0.15
PDGFB-204ENST00000455790 PGK1P00558 417 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 BMP8BP34820 402 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 OAZ1P54368 228 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 RTP1P59025 263 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 IRX6P78412 446 aaPredicted RBP14.12□□□□□ -0.15
PDGFB-204ENST00000455790 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 ARRDC4Q8NCT1 418 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 STAG1Q8WVM7 1258 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 FERMT2Q96AC1 680 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 DDX11Q96FC9 970 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 LRCH3Q96II8 777 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 XPNPEP3Q9NQH7 507 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 NEDD4P46934 1319 aa14.12□□□□□ -0.15
PDGFB-204ENST00000455790 ADCY6O43306 1168 aa14.11□□□□□ -0.15
PDGFB-204ENST00000455790 RARBP10826 455 aa14.11□□□□□ -0.15
PDGFB-204ENST00000455790 PDE4AP27815 886 aa14.11□□□□□ -0.15
PDGFB-204ENST00000455790 ADCYAP1R1P41586 468 aa14.11□□□□□ -0.15
PDGFB-204ENST00000455790 MDM2Q00987 491 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-204ENST00000455790 CNTN2Q02246 1040 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms