RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PHF20Q9BVI0 1012 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 BSDC1Q9NW68 430 aaPredicted RBP12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ZNF215Q9UL58 517 aaPredicted RBP12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 POLR2AP24928 1970 aaKnown RBP12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 C6orf229H3BNL8 230 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 ECE2O60344 883 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 HUNKP57058 714 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 SPAG1Q07617 926 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 HOMER1Q86YM7 354 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 CLIC6Q96NY7 704 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 ZSCAN10Q96SZ4 725 aaPredicted RBP12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 MCOLN1Q9GZU1 580 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 KCNQ5Q9NR82 932 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 TRMT1Q9NXH9 659 aaKnown RBP12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.49
GTF3C2-206ENST00000454704 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 A0A087WWV3 80 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 ADM5C9JUS6 153 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 SLFN14P0C7P3 912 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 CDK11BP21127 795 aaKnown RBP12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 SBK1Q52WX2 424 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 RRP12Q5JTH9 1297 aaKnown RBP12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 IFIT1BQ5T764 474 aaKnown RBP12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 KRT26Q7Z3Y9 468 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 SH3RF1Q7Z6J0 888 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 KRT222Q8N1A0 295 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 HELBQ8NG08 1087 aaPredicted RBP12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 DPF2Q92785 391 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 FBXW7Q969H0 707 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 PANX2Q96RD6 677 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 RIOK1Q9BRS2 568 aaKnown RBP12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 ANKRD2Q9GZV1 360 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 ATP8A2Q9NTI2 1148 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 FANCLQ9NW38 375 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 FAM53CQ9NYF3 392 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 ARPP21Q9UBL0 812 aaPredicted RBP12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 SERTAD1Q9UHV2 236 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
GTF3C2-206ENST00000454704 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 MYH1P12882 1939 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 A0A1B0GTH6 734 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 EFCAB8A8MWE9 144 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 POLR2DO15514 142 aaKnown RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 ATP1A3P13637 1013 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 H2AFXP16104 143 aaPredicted RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 ZSCAN20P17040 1043 aaPredicted RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 CALML3P27482 149 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 BCAMP50895 628 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 NOGQ13253 232 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 TRIM14Q14142 442 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 BMS1Q14692 1282 aaKnown RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 SPATA1Q5VX52 437 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 ARL6IP4Q66PJ3 421 aaKnown RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 SYT10Q6XYQ8 523 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 CERS3Q8IU89 383 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 FOXP4Q8IVH2 680 aaPredicted RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 BAG1Q99933 345 aaPredicted RBP12□□□□□ -0.49
GTF3C2-206ENST00000454704 MYL10Q9BUA6 226 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 SEC31BQ9NQW1 1179 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 RAI14Q9P0K7 980 aa12□□□□□ -0.49
GTF3C2-206ENST00000454704 NAV1Q8NEY1 1877 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 PRKAB2O43741 272 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 MYL1P05976 194 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 RPS12P25398 132 aaKnown RBP11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 KIF5BP33176 963 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 CBX1P83916 185 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 FUT2Q10981 343 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 JAKMIP3Q5VZ66 844 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 GALNT17Q6IS24 598 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 TMEM139Q8IV31 216 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 REXO1L1PQ8IX06 675 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 CTCFLQ8NI51 663 aaPredicted RBP11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 TBC1D16Q8TBP0 767 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 NUP133Q8WUM0 1156 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 EYA3Q99504 573 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 RMND1Q9NWS8 449 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 KCNJ14Q9UNX9 436 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 TACC3Q9Y6A5 838 aa11.99□□□□□ -0.49
GTF3C2-206ENST00000454704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 FAM155AB1AL88 458 aaPredicted RBP11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 UFL1O94874 794 aa11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 HOXA7P31268 230 aaPredicted RBP11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 GNAQP50148 359 aa11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 RPS8P62241 208 aaKnown RBP11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 ATP2C1P98194 919 aaPredicted RBP11.98□□□□□ -0.49
GTF3C2-206ENST00000454704 DGKZQ13574 1117 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms