RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 VIPR1P32241 457 aa7.52□□□□□ -1.21
CUL3-208ENST00000454323 YBX1P67809 324 aaKnown RBP7.52□□□□□ -1.21
CUL3-208ENST00000454323 ZDHHC14Q8IZN3 488 aa7.52□□□□□ -1.21
CUL3-208ENST00000454323 PANK1Q8TE04 598 aa7.52□□□□□ -1.21
CUL3-208ENST00000454323 MZB1Q8WU39 189 aa7.52□□□□□ -1.21
CUL3-208ENST00000454323 ARMC5Q96C12 935 aa7.52□□□□□ -1.21
CUL3-208ENST00000454323 CNTD2Q9H8S5 307 aa7.52□□□□□ -1.21
CUL3-208ENST00000454323 MPOP05164 745 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 PLCG1P19174 1290 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 EIF4BP23588 611 aaKnown RBP7.51□□□□□ -1.21
CUL3-208ENST00000454323 RPL10P27635 214 aaKnown RBP7.51□□□□□ -1.21
CUL3-208ENST00000454323 EPHB3P54753 998 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 CAP1Q01518 475 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 SIRT2Q8IXJ6 389 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 SLFN12Q8IYM2 578 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 GPR20Q99678 358 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
CUL3-208ENST00000454323 ZNF281Q9Y2X9 895 aa7.51□□□□□ -1.21
CUL3-208ENST00000454323 BPNT1O95861 308 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 LIG3P49916 1009 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 RACK1P63244 317 aaKnown RBP7.5□□□□□ -1.21
CUL3-208ENST00000454323 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 CEP128Q6ZU80 1094 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 FAM129CQ86XR2 697 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 SYTL5Q8TDW5 730 aaPredicted RBP7.5□□□□□ -1.21
CUL3-208ENST00000454323 MAP6Q96JE9 813 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 G6PC3Q9BUM1 346 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 BDH2Q9BUT1 245 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 PCDHB5Q9Y5E4 795 aa7.5□□□□□ -1.21
CUL3-208ENST00000454323 USP31Q70CQ4 1352 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 USP2O75604 605 aaPredicted RBP7.49□□□□□ -1.21
CUL3-208ENST00000454323 ATP2B1P20020 1258 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 PCBP3P57721 371 aaKnown RBP7.49□□□□□ -1.21
CUL3-208ENST00000454323 ERVFRD-1P60508 538 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 LAPTM5Q13571 262 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 GNL2Q13823 731 aaKnown RBP7.49□□□□□ -1.21
CUL3-208ENST00000454323 WAPLQ7Z5K2 1190 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 ZNF654Q8IZM8 581 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 CCDC74BQ96LY2 380 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 KREMEN1Q96MU8 473 aa7.49□□□□□ -1.21
CUL3-208ENST00000454323 RNF4P78317 190 aa7.48□□□□□ -1.21
CUL3-208ENST00000454323 ZNF394Q53GI3 561 aa7.48□□□□□ -1.21
CUL3-208ENST00000454323 GALNT18Q6P9A2 607 aa7.48□□□□□ -1.21
CUL3-208ENST00000454323 GIMAP6Q6P9H5 292 aa7.48□□□□□ -1.21
CUL3-208ENST00000454323 CCDC84Q86UT8 332 aaPredicted RBP7.48□□□□□ -1.21
CUL3-208ENST00000454323 DNAJC2Q99543 621 aaKnown RBP7.48□□□□□ -1.21
CUL3-208ENST00000454323 LNPKQ9C0E8 428 aa7.48□□□□□ -1.21
CUL3-208ENST00000454323 CDR1P51861 262 aa7.47□□□□□ -1.21
CUL3-208ENST00000454323 RBL2Q08999 1139 aa7.47□□□□□ -1.21
CUL3-208ENST00000454323 ZNF827Q17R98 1081 aa7.47□□□□□ -1.21
CUL3-208ENST00000454323 DAGLBQ8NCG7 672 aa7.47□□□□□ -1.21
CUL3-208ENST00000454323 PWWP2AQ96N64 755 aa7.47□□□□□ -1.21
CUL3-208ENST00000454323 EBF1Q9UH73 591 aa7.47□□□□□ -1.21
CUL3-208ENST00000454323 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
CUL3-208ENST00000454323 K7ESM1 405 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 GTF2F1P35269 517 aaKnown RBP eCLIP7.46□□□□□ -1.22
CUL3-208ENST00000454323 KCNC1P48547 511 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 GALK1P51570 392 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 NMIQ13287 307 aaPredicted RBP7.46□□□□□ -1.22
CUL3-208ENST00000454323 ZFYVE27Q5T4F4 411 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 NOP9Q86U38 636 aaKnown RBP7.46□□□□□ -1.22
CUL3-208ENST00000454323 USP48Q86UV5 1035 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 ZNF655Q8N720 491 aaPredicted RBP7.46□□□□□ -1.22
CUL3-208ENST00000454323 ADAM7Q9H2U9 754 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 EPB41L4AQ9HCS5 686 aaPredicted RBP7.46□□□□□ -1.22
CUL3-208ENST00000454323 TNFRSF10DQ9UBN6 386 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 INPP5FQ9Y2H2 1132 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 PCDHGB7Q9Y5F8 929 aa7.46□□□□□ -1.22
CUL3-208ENST00000454323 WTIPA6NIX2 430 aaPredicted RBP7.45□□□□□ -1.22
CUL3-208ENST00000454323 NOTOA8MTQ0 251 aa7.45□□□□□ -1.22
CUL3-208ENST00000454323 LRRN2O75325 713 aa7.45□□□□□ -1.22
CUL3-208ENST00000454323 INSRRP14616 1297 aa7.45□□□□□ -1.22
CUL3-208ENST00000454323 DNAJA1P31689 397 aaKnown RBP7.45□□□□□ -1.22
CUL3-208ENST00000454323 ARID5AQ03989 594 aa7.45□□□□□ -1.22
CUL3-208ENST00000454323 PUM1Q14671 1186 aaKnown RBP eCLIP7.45□□□□□ -1.22
CUL3-208ENST00000454323 HS2ST1Q7LGA3 356 aa7.45□□□□□ -1.22
CUL3-208ENST00000454323 LDHDQ86WU2 507 aa7.45□□□□□ -1.22
CUL3-208ENST00000454323 TMEFF1Q8IYR6 380 aa7.45□□□□□ -1.22
CUL3-208ENST00000454323 SHISA3A0PJX4 238 aa7.44□□□□□ -1.22
CUL3-208ENST00000454323 PFKLP17858 780 aa7.44□□□□□ -1.22
CUL3-208ENST00000454323 CDK11BP21127 795 aaKnown RBP7.44□□□□□ -1.22
CUL3-208ENST00000454323 ST13P50502 369 aaKnown RBP7.44□□□□□ -1.22
CUL3-208ENST00000454323 RTP1P59025 263 aa7.44□□□□□ -1.22
CUL3-208ENST00000454323 MLECQ14165 292 aa7.44□□□□□ -1.22
CUL3-208ENST00000454323 VMACQ2NL98 169 aa7.44□□□□□ -1.22
CUL3-208ENST00000454323 SYT8Q8NBV8 401 aa7.44□□□□□ -1.22
CUL3-208ENST00000454323 TCFL5Q9UL49 500 aa7.44□□□□□ -1.22
CUL3-208ENST00000454323 CDK11AQ9UQ88 783 aaPredicted RBP7.44□□□□□ -1.22
CUL3-208ENST00000454323 TAF1CQ15572 869 aaPredicted RBP7.43□□□□□ -1.22
CUL3-208ENST00000454323 UBXN11Q5T124 520 aa7.43□□□□□ -1.22
CUL3-208ENST00000454323 TMC6Q7Z403 805 aa7.43□□□□□ -1.22
CUL3-208ENST00000454323 PHACTR4Q8IZ21 702 aa7.43□□□□□ -1.22
CUL3-208ENST00000454323 LINC00116Q8NCU8 138 aa7.43□□□□□ -1.22
CUL3-208ENST00000454323 EAF1Q96JC9 268 aaPredicted RBP7.43□□□□□ -1.22
CUL3-208ENST00000454323 FCRL2Q96LA5 508 aaPredicted RBP7.43□□□□□ -1.22
CUL3-208ENST00000454323 HDAC8Q9BY41 377 aa7.43□□□□□ -1.22
CUL3-208ENST00000454323 USP40Q9NVE5 1235 aa7.43□□□□□ -1.22
CUL3-208ENST00000454323 GGT7Q9UJ14 662 aa7.43□□□□□ -1.22
CUL3-208ENST00000454323 UPK3BL1B0FP48 263 aa7.42□□□□□ -1.22
CUL3-208ENST00000454323 UPK3BL2E5RIL1 263 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms