RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 SLFNL1Q499Z3 407 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 CEP85Q6P2H3 762 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 CCDC129Q6ZRS4 1044 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 IL1RAPL2Q9NP60 686 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 FAM184BQ9ULE4 1060 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 RLBP1P12271 317 aa26.24■■□□□ 1.79
TNFRSF25-208ENST00000453341 FAM83BQ5T0W9 1011 aa26.24■■□□□ 1.79
TNFRSF25-208ENST00000453341 ADAMTS19Q8TE59 1207 aa26.24■■□□□ 1.79
TNFRSF25-208ENST00000453341 CCDC17Q96LX7 622 aa26.24■■□□□ 1.79
TNFRSF25-208ENST00000453341 MCM3APO60318 1980 aa26.24■■□□□ 1.79
TNFRSF25-208ENST00000453341 ELP1O95163 1332 aa26.23■■□□□ 1.79
TNFRSF25-208ENST00000453341 SYNGAP1Q96PV0 1343 aa26.23■■□□□ 1.79
TNFRSF25-208ENST00000453341 GOLIM4O00461 696 aa26.23■■□□□ 1.79
TNFRSF25-208ENST00000453341 ADCY6O43306 1168 aa26.23■■□□□ 1.79
TNFRSF25-208ENST00000453341 ACRP10323 421 aa26.23■■□□□ 1.79
TNFRSF25-208ENST00000453341 ZHX1Q9UKY1 873 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF25-208ENST00000453341 TRANK1O15050 2925 aa26.23■■□□□ 1.79
TNFRSF25-208ENST00000453341 DUSP11O75319 330 aaKnown RBP26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 CST5P28325 142 aaPredicted RBP26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 COPB2P35606 906 aa26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 C12orf60Q5U649 245 aa26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 MAMDC4Q6UXC1 1216 aa26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 ZNF365Q70YC5 407 aa26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 ERC1Q8IUD2 1116 aa26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 ITPRIPQ8IWB1 547 aa26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 MSL3Q8N5Y2 521 aaKnown RBP26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 GLT1D1Q96MS3 346 aa26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 DNAJC2Q99543 621 aaKnown RBP26.22■■□□□ 1.79
TNFRSF25-208ENST00000453341 GBF1Q92538 1859 aa26.21■■□□□ 1.79
TNFRSF25-208ENST00000453341 MROH7Q68CQ1 1323 aa26.21■■□□□ 1.79
TNFRSF25-208ENST00000453341 DNAJC25-GNG10A0A024R161 153 aa26.21■■□□□ 1.79
TNFRSF25-208ENST00000453341 MBD4O95243 580 aa26.21■■□□□ 1.79
TNFRSF25-208ENST00000453341 CCDC85BQ15834 202 aaPredicted RBP26.21■■□□□ 1.79
TNFRSF25-208ENST00000453341 C16orf86Q6ZW13 317 aa26.21■■□□□ 1.79
TNFRSF25-208ENST00000453341 RIPK3Q9Y572 518 aa26.21■■□□□ 1.79
TNFRSF25-208ENST00000453341 ASGR1P07306 291 aa26.2■■□□□ 1.78
TNFRSF25-208ENST00000453341 CCDC174Q6PII3 467 aa26.2■■□□□ 1.78
TNFRSF25-208ENST00000453341 UHRF1Q96T88 793 aaPredicted RBP26.2■■□□□ 1.78
TNFRSF25-208ENST00000453341 PPP1R12CQ9BZL4 782 aa26.2■■□□□ 1.78
TNFRSF25-208ENST00000453341 KANSL2Q9H9L4 492 aa26.2■■□□□ 1.78
TNFRSF25-208ENST00000453341 GOPCQ9HD26 462 aa26.2■■□□□ 1.78
TNFRSF25-208ENST00000453341 ATP8A2Q9NTI2 1148 aa26.2■■□□□ 1.78
TNFRSF25-208ENST00000453341 USP17L12C9JPN9 530 aa26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 USP17L21D6R901 530 aa26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 RAD21O60216 631 aa26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 C6orf222P0C671 652 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 MRPS5P82675 430 aaKnown RBP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 SNRNP48Q6IEG0 339 aaKnown RBP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 FAM126BQ8IXS8 530 aa26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 FTSJ3Q8IY81 847 aaKnown RBP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 TMEM199Q8N511 208 aa26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 RHPN1Q8TCX5 695 aa26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 NUP88Q99567 741 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 TEX13BQ9BXU2 312 aa26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 CXXC1Q9P0U4 656 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 GREB1LQ9C091 1923 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF25-208ENST00000453341 A0A0U1RQG5 324 aaPredicted RBP26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 ARVCFO00192 962 aa26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 CHGBP05060 677 aa26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 ACVR2BQ13705 512 aa26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 PSRC1Q6PGN9 363 aaPredicted RBP26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 DDX11Q96FC9 970 aa26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 FGD4Q96M96 766 aa26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 UPF3AQ9H1J1 476 aaKnown RBP26.18■■□□□ 1.78
TNFRSF25-208ENST00000453341 IGFBP4P22692 258 aa26.17■■□□□ 1.78
TNFRSF25-208ENST00000453341 ADD2P35612 726 aa26.17■■□□□ 1.78
TNFRSF25-208ENST00000453341 PCSK9Q8NBP7 692 aaKnown RBP26.17■■□□□ 1.78
TNFRSF25-208ENST00000453341 VTI1AQ96AJ9 217 aa26.17■■□□□ 1.78
TNFRSF25-208ENST00000453341 SLF1Q9BQI6 1058 aa26.17■■□□□ 1.78
TNFRSF25-208ENST00000453341 NKX2-4Q9H2Z4 354 aa26.17■■□□□ 1.78
TNFRSF25-208ENST00000453341 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.17■■□□□ 1.78
TNFRSF25-208ENST00000453341 TCF20Q9UGU0 1960 aaKnown RBP26.16■■□□□ 1.78
TNFRSF25-208ENST00000453341 CYP2C18P33260 490 aa26.16■■□□□ 1.78
TNFRSF25-208ENST00000453341 PLA2G5P39877 138 aa26.16■■□□□ 1.78
TNFRSF25-208ENST00000453341 GJA9P57773 515 aa26.16■■□□□ 1.78
TNFRSF25-208ENST00000453341 HERVK_113Q902F9 699 aa26.16■■□□□ 1.78
TNFRSF25-208ENST00000453341 MSRAQ9UJ68 235 aa26.16■■□□□ 1.78
TNFRSF25-208ENST00000453341 YBX2Q9Y2T7 364 aaKnown RBP26.16■■□□□ 1.78
TNFRSF25-208ENST00000453341 CTAGE5O15320 804 aa26.15■■□□□ 1.78
TNFRSF25-208ENST00000453341 CD4P01730 458 aa26.15■■□□□ 1.78
TNFRSF25-208ENST00000453341 RAB30Q15771 203 aa26.15■■□□□ 1.78
TNFRSF25-208ENST00000453341 CCDC144BQ3MJ40 725 aa26.15■■□□□ 1.78
TNFRSF25-208ENST00000453341 ZNF467Q7Z7K2 595 aaPredicted RBP26.15■■□□□ 1.78
TNFRSF25-208ENST00000453341 IL23AQ9NPF7 189 aa26.15■■□□□ 1.78
TNFRSF25-208ENST00000453341 ZBED9Q6R2W3 1325 aa26.14■■□□□ 1.78
TNFRSF25-208ENST00000453341 APBB1O00213 710 aa26.14■■□□□ 1.78
TNFRSF25-208ENST00000453341 GNASQ5JWF2 1037 aa26.14■■□□□ 1.78
TNFRSF25-208ENST00000453341 CTR9Q6PD62 1173 aa26.14■■□□□ 1.78
TNFRSF25-208ENST00000453341 UMODL1Q5DID0 1318 aa26.14■■□□□ 1.77
TNFRSF25-208ENST00000453341 SLC4A3P48751 1232 aa26.13■■□□□ 1.77
TNFRSF25-208ENST00000453341 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.13■■□□□ 1.77
TNFRSF25-208ENST00000453341 NECAB3Q96P71 396 aaPredicted RBP26.13■■□□□ 1.77
TNFRSF25-208ENST00000453341 ABHD16BQ9H3Z7 469 aa26.13■■□□□ 1.77
TNFRSF25-208ENST00000453341 SPC25Q9HBM1 224 aa26.13■■□□□ 1.77
TNFRSF25-208ENST00000453341 PAG1Q9NWQ8 432 aa26.13■■□□□ 1.77
TNFRSF25-208ENST00000453341 ATP2A1O14983 1001 aa26.12■■□□□ 1.77
TNFRSF25-208ENST00000453341 TLR3O15455 904 aaKnown RBP26.12■■□□□ 1.77
TNFRSF25-208ENST00000453341 ARMCX2Q7L311 632 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms