RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 ATP2A1O14983 1001 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 RARBP10826 455 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 PPARAQ07869 468 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 LRIT3Q3SXY7 679 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 MSL3Q8N5Y2 521 aaKnown RBP21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 GMCL1P1Q8NEA9 526 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 KIFC2Q96AC6 838 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 LRCH3Q96II8 777 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 CNPY2Q9Y2B0 182 aa21.87■■□□□ 1.09
TNFRSF25-207ENST00000453260 SLC4A3P48751 1232 aa21.86■■□□□ 1.09
TNFRSF25-207ENST00000453260 MDM2Q00987 491 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF25-207ENST00000453260 TFAP4Q01664 338 aa21.86■■□□□ 1.09
TNFRSF25-207ENST00000453260 SLC39A5Q6ZMH5 540 aa21.86■■□□□ 1.09
TNFRSF25-207ENST00000453260 CPXCR1Q8N123 301 aa21.86■■□□□ 1.09
TNFRSF25-207ENST00000453260 EVI5LQ96CN4 794 aa21.86■■□□□ 1.09
TNFRSF25-207ENST00000453260 FDX1P10109 184 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 RTP1P59025 263 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 LRRC41Q15345 812 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 SLFN13Q68D06 897 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 RNF180Q86T96 592 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 CRBNQ96SW2 442 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 XPNPEP3Q9NQH7 507 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 FBXO40Q9UH90 709 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 ATP11BQ9Y2G3 1177 aa21.85■■□□□ 1.09
TNFRSF25-207ENST00000453260 BMP3P12645 472 aa21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 ADCYAP1R1P41586 468 aa21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 HDAC1Q13547 482 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 FAM47AQ5JRC9 791 aa21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 LRRC47Q8N1G4 583 aaKnown RBP21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 SLC38A10Q9HBR0 1119 aa21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 ISY1Q9ULR0 285 aaKnown RBP21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 PLIN4Q96Q06 1357 aa21.84■■□□□ 1.09
TNFRSF25-207ENST00000453260 AKR1A1P14550 325 aa21.83■■□□□ 1.09
TNFRSF25-207ENST00000453260 OAZ1P54368 228 aa21.83■■□□□ 1.09
TNFRSF25-207ENST00000453260 AAMPQ13685 434 aa21.83■■□□□ 1.09
TNFRSF25-207ENST00000453260 ANKRD35Q8N283 1001 aa21.83■■□□□ 1.09
TNFRSF25-207ENST00000453260 CHST13Q8NET6 341 aa21.83■■□□□ 1.09
TNFRSF25-207ENST00000453260 CHURC1Q8WUH1 139 aa21.83■■□□□ 1.09
TNFRSF25-207ENST00000453260 RAVER2Q9HCJ3 691 aaKnown RBP21.83■■□□□ 1.09
TNFRSF25-207ENST00000453260 SYNGAP1Q96PV0 1343 aa21.82■■□□□ 1.08
TNFRSF25-207ENST00000453260 TSPY2A6NKD2 308 aa21.82■■□□□ 1.08
TNFRSF25-207ENST00000453260 TICAM2Q86XR7 235 aa21.82■■□□□ 1.08
TNFRSF25-207ENST00000453260 HELLSQ9NRZ9 838 aa21.82■■□□□ 1.08
TNFRSF25-207ENST00000453260 RIPK3Q9Y572 518 aa21.82■■□□□ 1.08
TNFRSF25-207ENST00000453260 SALL3Q9BXA9 1300 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 TMEM232C9JQI7 657 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 SLC1A4P43007 532 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 STAT2P52630 851 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 PDE1AP54750 535 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 IKQ13123 557 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 C1orf53Q5VUE5 145 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 MAMDC4Q6UXC1 1216 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 ZNF467Q7Z7K2 595 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 FAM160B2Q86V87 743 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 FERMT2Q96AC1 680 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 FAM184BQ9ULE4 1060 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 STX8Q9UNK0 236 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 PHF24Q9UPV7 400 aa21.81■■□□□ 1.08
TNFRSF25-207ENST00000453260 DNAJC25-GNG10A0A024R161 153 aa21.8■■□□□ 1.08
TNFRSF25-207ENST00000453260 ZNF865P0CJ78 1059 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF25-207ENST00000453260 TAL1P17542 331 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF25-207ENST00000453260 SNX17Q15036 470 aa21.8■■□□□ 1.08
TNFRSF25-207ENST00000453260 CCDC129Q6ZRS4 1044 aa21.8■■□□□ 1.08
TNFRSF25-207ENST00000453260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.8■■□□□ 1.08
TNFRSF25-207ENST00000453260 GMCL1Q96IK5 515 aa21.8■■□□□ 1.08
TNFRSF25-207ENST00000453260 PGK1P00558 417 aa21.79■■□□□ 1.08
TNFRSF25-207ENST00000453260 CTDSPL2Q05D32 466 aa21.79■■□□□ 1.08
TNFRSF25-207ENST00000453260 TRIM60Q495X7 471 aa21.79■■□□□ 1.08
TNFRSF25-207ENST00000453260 DEFB123Q8N688 67 aa21.79■■□□□ 1.08
TNFRSF25-207ENST00000453260 STAG1Q8WVM7 1258 aa21.79■■□□□ 1.08
TNFRSF25-207ENST00000453260 PRDM5Q9NQX1 630 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF25-207ENST00000453260 ANAPC4Q9UJX5 808 aa21.79■■□□□ 1.08
TNFRSF25-207ENST00000453260 RANBP6O60518 1105 aaKnown RBP21.78■■□□□ 1.08
TNFRSF25-207ENST00000453260 MCCP23508 829 aa21.78■■□□□ 1.08
TNFRSF25-207ENST00000453260 ALX1Q15699 326 aa21.78■■□□□ 1.08
TNFRSF25-207ENST00000453260 MCMDC2Q4G0Z9 681 aa21.78■■□□□ 1.08
TNFRSF25-207ENST00000453260 TSEN34Q9BSV6 310 aaKnown RBP21.78■■□□□ 1.08
TNFRSF25-207ENST00000453260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.78■■□□□ 1.08
TNFRSF25-207ENST00000453260 PLA2G6O60733 806 aa21.77■■□□□ 1.08
TNFRSF25-207ENST00000453260 SNAI1O95863 264 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF25-207ENST00000453260 TKFCQ3LXA3 575 aa21.77■■□□□ 1.08
TNFRSF25-207ENST00000453260 RCSD1Q6JBY9 416 aa21.77■■□□□ 1.08
TNFRSF25-207ENST00000453260 ABHD16BQ9H3Z7 469 aa21.77■■□□□ 1.08
TNFRSF25-207ENST00000453260 RWDD1Q9H446 243 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF25-207ENST00000453260 ZHX1Q9UKY1 873 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF25-207ENST00000453260 ACVR2BQ13705 512 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 VPS53Q5VIR6 699 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 NUP133Q8WUM0 1156 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 ACAD9Q9H845 621 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 SPC25Q9HBM1 224 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 IL17RBQ9NRM6 502 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 TOMM22Q9NS69 142 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 HOMER2Q9NSB8 354 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 TACC3Q9Y6A5 838 aa21.76■■□□□ 1.07
TNFRSF25-207ENST00000453260 TRIM6-TRIM34B2RNG4 842 aa21.75■■□□□ 1.07
TNFRSF25-207ENST00000453260 FOXP2O15409 715 aa21.75■■□□□ 1.07
TNFRSF25-207ENST00000453260 ORC4O43929 436 aa21.75■■□□□ 1.07
TNFRSF25-207ENST00000453260 DUSP11O75319 330 aaKnown RBP21.75■■□□□ 1.07
TNFRSF25-207ENST00000453260 TLE2Q04725 743 aa21.75■■□□□ 1.07
TNFRSF25-207ENST00000453260 INCENPQ9NQS7 918 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms